DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUL1 and mib-1

DIOPT Version :9

Sequence 1:NP_012890.1 Gene:TUL1 / 853832 SGDID:S000001517 Length:758 Species:Saccharomyces cerevisiae
Sequence 2:NP_499452.2 Gene:mib-1 / 176558 WormBaseID:WBGene00012933 Length:765 Species:Caenorhabditis elegans


Alignment Length:62 Identity:18/62 - (29%)
Similarity:26/62 - (41%) Gaps:19/62 - (30%)


- Green bases have known domain annotations that are detailed below.


Yeast   694 EHTVDCAICMSDVPIYIEEIPETHKVDQHSYMVTPCNHVFHTSCLENWMNYKLQCPVCRSPL 755
            |...:||||| |:.|.:               |..|.   ||:|::.....|.||.:||..:
 Worm   715 ELETNCAICM-DLKIAV---------------VFNCG---HTACVDCADKLKKQCHICRKTI 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUL1NP_012890.1 COG5540 320..758 CDD:227827 18/62 (29%)
mib-1NP_499452.2 ANK repeat 242..273 CDD:293786
Ank_2 247..>313 CDD:289560
ANK repeat 275..307 CDD:293786
ANK 341..459 CDD:238125
ANK repeat 343..379 CDD:293786
Ank_4 344..402 CDD:290365
Ank_4 382..436 CDD:290365
ANK repeat 384..413 CDD:293786
ANK 410..579 CDD:238125
ANK repeat 415..446 CDD:293786
Ank_2 420..>494 CDD:289560
ANK repeat 448..488 CDD:293786
ANK repeat 490..557 CDD:293786
zf-C3HC4_3 611..650 CDD:290631
zf-C3HC4_3 717..760 CDD:290631 17/60 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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