DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUL1 and rnf-145

DIOPT Version :9

Sequence 1:NP_012890.1 Gene:TUL1 / 853832 SGDID:S000001517 Length:758 Species:Saccharomyces cerevisiae
Sequence 2:NP_491382.2 Gene:rnf-145 / 172053 WormBaseID:WBGene00022471 Length:742 Species:Caenorhabditis elegans


Alignment Length:458 Identity:99/458 - (21%)
Similarity:158/458 - (34%) Gaps:205/458 - (44%)


- Green bases have known domain annotations that are detailed below.


Yeast   390 ELKIMSIRKHLLF-GIALFAAQIY---------------LLLTQM-HHTNTP----SMVNKISFY 433
            :|:|:.:   |.| .|.:|...:|               :|||.: ..||||    ::...:|:.
 Worm   282 KLRILEL---LTFTWITMFLMVLYVELIDKGRTWSEVGRILLTGVAETTNTPITLAALAVSVSYV 343

Yeast   434 C---FSMINLVDGSLATL--------YFVAASVV-------------------PELYLPLVISAF 468
            |   ..:..|:.|...:.        |..|.|||                   ..|.|.:|||| 
 Worm   344 CKWIADLTKLITGGTRSHGHVLAHSGYTEAVSVVILCIQTGFLGMQVEQKTILLALVLYIVISA- 407

Yeast   469 SCFILASIFEIRYLISIYASQVNEQNVGIINLLRGNTGTYDENRPRPA----------FIPDEGS 523
               :|.|:|||..::             ::||....|.    :|.|.|          .||    
 Worm   408 ---LLQSLFEIIEVV-------------LLNLPSSPTA----SRARHARCICIALLLVVIP---- 448

Yeast   524 IGGSLYGRFFF----MLI-----IFTFLIL--SSTSWPRQLRMVFEYILIFILN----------- 566
                     ||    ||.     |:|.:|:  |:|...|.:.::.:||::.:..           
 Worm   449 ---------FFTTKTMLALLPIDIYTAIIIANSATVTARAIGVILKYIVLIVETKSEEPWEGIDD 504

Yeast   567 -SYWIPQIFRNAVKGIPSRRERARSSIGGNRSQNKMPLLWSFVIGTTIIRSLPVVYV-FTYSSNV 629
             :|:|.    .|.|||                    .||.:.|:  .:...:.||.| |::::  
 Worm   505 LTYYID----CANKGI--------------------ELLAAKVV--MVFGCMQVVKVGFSFAT-- 541

Yeast   630 FRHHKDVHFVVFLSLWLLFQISI-LYSQDVLGSRWFLPKHTIPDGYSYFK----------PLSNE 683
                    |.:     |||.:.: :|.:         .:||:    |:.|          .||..
 Worm   542 --------FAI-----LLFHVIVNIYKR---------LEHTV----SFIKNRNAAVKNINRLSKA 580

Yeast   684 YISEHGGGTAEHTVDCAICMSDVPIYIEEIPETHKVDQHSYMVTPCNHVFHTSCLENWMNYKLQC 748
            .:.:    ..|....||||      :||...|..        :|||.|.||..||..|:..|:.|
 Worm   581 DVVQ----LREREDVCAIC------FIEMKEEAR--------ITPCKHYFHGPCLRKWLAVKMVC 627

Yeast   749 PVC 751
            |:|
 Worm   628 PLC 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUL1NP_012890.1 COG5540 320..758 CDD:227827 99/458 (22%)
rnf-145NP_491382.2 TRC8_N 49..556 CDD:372682 72/351 (21%)
RING-H2_RNF139_like 590..631 CDD:319390 20/55 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R7680
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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