DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCN5 and dikar

DIOPT Version :9

Sequence 1:NP_011768.1 Gene:GCN5 / 853167 SGDID:S000003484 Length:439 Species:Saccharomyces cerevisiae
Sequence 2:NP_001261480.1 Gene:dikar / 38747 FlyBaseID:FBgn0261934 Length:3261 Species:Drosophila melanogaster


Alignment Length:104 Identity:43/104 - (41%)
Similarity:61/104 - (58%) Gaps:2/104 - (1%)


- Green bases have known domain annotations that are detailed below.


Yeast   336 IQNILTELQNHAAAWPFLQPVNKEEVPDYYDFIKEPMDLSTMEIKLESNKYQKMEDFIYDARLVF 400
            :..:|..::||..||||:.||.::..|.||..|:.||||..||.||:|.:|.|..:|..|.||:.
  Fly   896 MHKVLVYVKNHRDAWPFVDPVEEDIAPRYYSIIRRPMDLLKMEDKLDSGEYHKFSEFRNDFRLIV 960

Yeast   401 NNCRMYNGENTSYYKYANRLEKFFNNKVKEIPEYSHLID 439
            ||||:|||.|..|.:..|.|:..|....|:.  :.:|.|
  Fly   961 NNCRLYNGHNNEYTEMVNNLQDAFEKATKKY--FDNLSD 997

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCN5NP_011768.1 COG5076 77..439 CDD:227408 42/102 (41%)
dikarNP_001261480.1 WHIM1 100..148 CDD:292246
Bromo_gcn5_like 892..991 CDD:99941 41/94 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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