DRSC/TRiP Functional Genomics Resources

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Protein Alignment TCM62 and Spf45

DIOPT Version :9

Sequence 1:NP_009600.2 Gene:TCM62 / 852332 SGDID:S000000248 Length:572 Species:Saccharomyces cerevisiae
Sequence 2:NP_001036426.1 Gene:Spf45 / 3355114 FlyBaseID:FBgn0086683 Length:403 Species:Drosophila melanogaster


Alignment Length:146 Identity:36/146 - (24%)
Similarity:56/146 - (38%) Gaps:43/146 - (29%)


- Green bases have known domain annotations that are detailed below.


Yeast    13 QTKCSV-----KTLHTPI--YRTKNLQ-------------VLRDTLSGIKLLEKI---ITSSSYN 54
            ||:.:|     |.|.||:  .|:|.|.             |.:..:|| |.|..|   |....::
  Fly    27 QTQLAVKMAVKKPLMTPVVNLRSKRLADPEVTCFAPITTVVSKPLISG-KALPSILERINRGDWD 90

Yeast    55 KTLIYEP----KYKSKPQVVSSHDTMRLHNVMRELLDSLQVDEATNTRLQSNRPRKLGRVGLQLF 115
            ....|:|    :|:...:..:..|..|.....||..|..:.|            ||.||||.:.|
  Fly    91 VADEYDPQRPNEYEKLKEKSNGSDKNRAGVSDREDRDDKEKD------------RKRGRVGRREF 143

Yeast   116 MDCIQDNLTATSTSLT 131
               .:|.::|.:..|:
  Fly   144 ---YRDEVSAPNLKLS 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TCM62NP_009600.2 PTZ00114 124..492 CDD:185455 2/8 (25%)
Spf45NP_001036426.1 G-patch 209..248 CDD:279867
RRM_UHM_SPF45 307..402 CDD:241091
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.78878 Normalized mean entropy S3904
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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