DRSC/TRiP Functional Genomics Resources

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Protein Alignment FUS3 and rl

DIOPT Version :9

Sequence 1:NP_009537.1 Gene:FUS3 / 852265 SGDID:S000000112 Length:353 Species:Saccharomyces cerevisiae
Sequence 2:NP_001015122.1 Gene:rl / 3354888 FlyBaseID:FBgn0003256 Length:376 Species:Drosophila melanogaster


Alignment Length:346 Identity:176/346 - (50%)
Similarity:234/346 - (67%) Gaps:14/346 - (4%)


- Green bases have known domain annotations that are detailed below.


Yeast     6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHEN 70
            ::.:...:...:.:||||||:|.||....|.:.||||||.||:...:..||||||.||..|||||
  Fly    31 IFEVGPRYIKLAYIGEGAYGMVVSADDTLTNQRVAIKKISPFEHQTYCQRTLREITILTRFKHEN 95

Yeast    71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIH 135
            ||.|.:|.|.||.:...:|||:|.||:|||::::.||.||:|||.||:||.||.:|.:|.:||:|
  Fly    96 IIDIRDILRVDSIDQMRDVYIVQCLMETDLYKLLKTQRLSNDHICYFLYQILRGLKYIHSANVLH 160

Yeast   136 RDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG-MTEYVATRWYRAPEVMLTSAK 199
            |||||||||:|..||||:||||||||.|        |....:| :|||||||||||||:||.|..
  Fly   161 RDLKPSNLLLNKTCDLKICDFGLARIAD--------PEHDHTGFLTEYVATRWYRAPEIMLNSKG 217

Yeast   200 YSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
            |::::|:||.||||||:...||||||:.|..||..|.|::|:|..| ||.||.:.:||.|::|||
  Fly   218 YTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGVLGSPSRD-DLECIINEKARNYLESLP 281

Yeast   265 MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFF 329
            ..|..|..|:||..:...:|||.:||.|:|.|||..:|||.||||:.|:||.|||..| :|   |
  Fly   282 FKPNVPWAKLFPNADALALDLLGKMLTFNPHKRIPVEEALAHPYLEQYYDPGDEPVAE-VP---F 342

Yeast   330 EFDHYKEALTTKDLKKLIWNE 350
            ..:...:.::...||.||:.|
  Fly   343 RINMENDDISRDALKSLIFEE 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FUS3NP_009537.1 STKc_ERK1_2_like 7..353 CDD:270839 176/345 (51%)
rlNP_001015122.1 STKc_ERK1_2_like 32..366 CDD:270839 176/345 (51%)
S_TKc 38..326 CDD:214567 160/296 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 323 1.000 Domainoid score I178
eggNOG 1 0.900 - - E1_KOG0660
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 346 1.000 Inparanoid score I402
Isobase 1 0.950 - 0 Normalized mean entropy S246
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000164
OrthoInspector 1 1.000 - - otm46891
orthoMCL 1 0.900 - - OOG6_100339
Panther 1 1.100 - - LDO PTHR24055
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1382
SonicParanoid 1 1.000 - - X259
TreeFam 1 0.960 - -
1312.800

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