DRSC/TRiP Functional Genomics Resources

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Protein Alignment SUP35 and eEF1alpha1

DIOPT Version :9

Sequence 1:NP_010457.3 Gene:SUP35 / 851752 SGDID:S000002579 Length:685 Species:Saccharomyces cerevisiae
Sequence 2:NP_001286321.1 Gene:eEF1alpha1 / 36271 FlyBaseID:FBgn0284245 Length:463 Species:Drosophila melanogaster


Alignment Length:461 Identity:165/461 - (35%)
Similarity:262/461 - (56%) Gaps:38/461 - (8%)


- Green bases have known domain annotations that are detailed below.


Yeast   257 GKD--HVSLIFMGHVDAGKSTMGGNLLYLTGSVDKRTIEKYEREAKDAGRQGWYLSWVMDTNKEE 319
            ||:  |::::.:||||:||||..|:|:|..|.:|||||||:|:||::.|:..:..:||:|..|.|
  Fly     2 GKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAE 66

Yeast   320 RNDGKTIEVGKAYFETEKRRYTILDAPGHKMYVSEMIGGASQADVGVLVISARKGEYETGFERGG 384
            |..|.||::....|||.|...||:|||||:.::..||.|.||||..||:::|..||:|.|..:.|
  Fly    67 RERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNG 131

Yeast   385 QTREHALLAKTQGVNKMVVVVNKMDDPTVNWSKERYDQCVSNVSNFLRAIGYNIKTDVVFMPVSG 449
            |||||||||.|.||.:::|.|||||.....:|:.||::....||::::.|||| ...|.|:|:||
  Fly   132 QTREHALLAFTLGVKQLIVGVNKMDSSEPPYSEARYEEIKKEVSSYIKKIGYN-PAAVAFVPISG 195

Yeast   450 YSGANLKDHVDPK-ECPWY------------TGPTLLEYLDTMNHVDRHINAPFMLPI--AAKMK 499
            :.|.|:   ::|. ..||:            .|.||::.||.:....|..:....||:  ..|:.
  Fly   196 WHGDNM---LEPSTNMPWFKGWKVERKEGNADGKTLIDALDAILPPARPTDKALRLPLQDVYKIG 257

Yeast   500 DLGTIVEGKIESGHIKKGQSTLLMPNKTAVEIQNIYNETENE-VDMAMCGEQVKLRIKGVEEEDI 563
            .:||:..|::|:|.:|.|...:..|.....|::::  |..:| :..|:.|:.|...:|.|..:::
  Fly   258 GIGTVPVGRVETGVLKPGTVVVFAPANITTEVKSV--EMHHEALQEAVPGDNVGFNVKNVSVKEL 320

Yeast   564 SPGFVLTSPK-NPIKSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNR 627
            ..|:|....| ||.|....|.||:.::.....||.|::.|:..|||.......::..|:::.:.:
  Fly   321 RRGYVAGDSKANPPKGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGK 385

Yeast   628 KSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAI-------------GK 679
            .:::.|.|.|.|...|..|....|:|||.:|::|.||||.:||...|:|:             ||
  Fly   386 TTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASGGK 450

Yeast   680 IVKIAE 685
            :.|.||
  Fly   451 VTKAAE 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SUP35NP_010457.3 PRK10263 <30..>199 CDD:236669
TEF1 254..685 CDD:227581 163/459 (36%)
eEF1alpha1NP_001286321.1 PTZ00141 1..457 CDD:185474 165/461 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5256
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X149
TreeFam 00.000 Not matched by this tool.
32.810

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