DRSC/TRiP Functional Genomics Resources

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Protein Alignment PEX3 and pex3

DIOPT Version :10

Sequence 1:NP_003621.1 Gene:PEX3 / 8504 HGNCID:8858 Length:373 Species:Homo sapiens
Sequence 2:NP_956522.1 Gene:pex3 / 393197 ZFINID:ZDB-GENE-040426-979 Length:364 Species:Danio rerio


Alignment Length:377 Identity:278/377 - (73%)
Similarity:317/377 - (84%) Gaps:17/377 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLRSVWNFLKRHKKKCIFLGTVLGGVYILGKYGQKKIREIQEREAAEYIAQARRQYHFESNQRTC 65
            ||.|.|||:||||:|.||.|..:||||:||||.|:||:|:|||||||||||||||:|||||||||
Zfish     1 MLSSTWNFIKRHKRKFIFTGVFVGGVYLLGKYAQRKIQEMQEREAAEYIAQARRQFHFESNQRTC 65

Human    66 NMTVLSMLPTLREALMQQLNSESLTALLKNRPSNKLEIWEDLKIISFTRSTVAVYSTCMLVVLLR 130
            ||||||||||||||::..|||||||.|||.:|:|||||||||||||||||.||||||||||||||
Zfish    66 NMTVLSMLPTLREAIIHHLNSESLTTLLKTKPANKLEIWEDLKIISFTRSIVAVYSTCMLVVLLR 130

Human   131 VQLNIIGGYIYLDNAAVGKNGTTILAPPDVQQQYLSSIQHLLGDGLTELITVIKQAVQKVLGSVS 195
            |||||||||:|||| :|.|||.|.|||||||||||||||||||:||.|||||:|:|||:|.|.||
Zfish   131 VQLNIIGGYLYLDN-SVTKNGMTPLAPPDVQQQYLSSIQHLLGEGLMELITVVKKAVQEVFGLVS 194

Human   196 LKHSLSLLDLEQKLKEIRNLVE----QHKSSSWINKDGSKPLLCHYMMPDEETPLAVQACGLSPR 256
            ||.||||.:|||:|.:||.|||    ::|..||            |||||||..||.|||||:..
Zfish   195 LKQSLSLQELEQQLTQIRQLVEDDSSKYKGLSW------------YMMPDEENTLASQACGLTEN 247

Human   257 DITTIKLLNETRDMLESPDFSTVLNTCLNRGFSRLLDNMAEFFRPTEQDLQHGNSMNSLSSVSLP 321
            |:||||||||||||||||||:.||:|||||||.|.||||||||||.::|....::.:.||.||||
Zfish   248 DVTTIKLLNETRDMLESPDFNIVLHTCLNRGFVRFLDNMAEFFRPPQRDSTPSSTPDQLSHVSLP 312

Human   322 LAKIIPIVNGQIHSVCSETPSHFVQDLLTMEQVKDFAANVYEAFSTPQQLEK 373
            |||||||:||||||:|||.|||||||||.::|||:|||||||.|||||:|:|
Zfish   313 LAKIIPIINGQIHSICSEIPSHFVQDLLLIDQVKEFAANVYETFSTPQELQK 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PEX3NP_003621.1 Targeting to peroxisomes. /evidence=ECO:0000269|PubMed:11390669 1..45 29/43 (67%)
Peroxin-3 11..362 CDD:428171 261/354 (74%)
Interaction with PEX19. /evidence=ECO:0000269|PubMed:11390669 120..136 15/15 (100%)
pex3NP_956522.1 Peroxin-3 11..353 CDD:428171 261/354 (74%)

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