DRSC/TRiP Functional Genomics Resources

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Protein Alignment RBM17 and Spf45

DIOPT Version :10

Sequence 1:NP_116294.1 Gene:RBM17 / 84991 HGNCID:16944 Length:401 Species:Homo sapiens
Sequence 2:NP_001036426.1 Gene:Spf45 / 3355114 FlyBaseID:FBgn0086683 Length:403 Species:Drosophila melanogaster


Alignment Length:456 Identity:161/456 - (35%)
Similarity:219/456 - (48%) Gaps:113/456 - (24%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSLYDDLGVETSDSKTEGWSKNFKLLQSQLQVKKAALTQAKSQRTKQSTVLAPVIDLKRGGSSDD 65
            |.|||.:......|:.:|||...|:||:||.||.|.          :..::.||::|:....:|.
  Fly     1 MDLYDGIDTRARSSQIDGWSSGIKMLQTQLAVKMAV----------KKPLMTPVVNLRSKRLADP 55

Human    66 RQIVDTPPHVAAGLKDPVPSGFSAGEVL-------IPLADEYDPMFPNDYEKVVKRQREERQRQR 123
            ......|  :...:..|:.||.:...:|       ..:||||||..||:|||:.::.....:.:.
  Fly    56 EVTCFAP--ITTVVSKPLISGKALPSILERINRGDWDVADEYDPQRPNEYEKLKEKSNGSDKNRA 118

Human   124 ELERQKEIEEREKRRK----DRHE------------ASGFARRPDPDSDEDEDYERERRKRSMGG 172
            .:..:::.:::||.||    .|.|            .|||..|   .:|:|............||
  Fly   119 GVSDREDRDDKEKDRKRGRVGRREFYRDEVSAPNLKLSGFGHR---QNDDDMYLPSPGLVAKQGG 180

Human   173 AAIAPPTSL----VEKDKELPRDFPYEEDSRPRSQSSKAAIPPPVYEEQDRPRSPTGPSNSFLAN 233
            |.||||.||    ::...|.....||...|                                   
  Fly   181 ATIAPPPSLQEMSIDSGCEATNTMPYSASS----------------------------------- 210

Human   234 MGGTVAHKIMQKYGFREGQGLGKHEQGLSTALSVEKTSKRGGKII----------------VGDA 282
                ||.|||.||||::||||||.|||::.||.|||||||||:||                :|..
  Fly   211 ----VAAKIMAKYGFKDGQGLGKSEQGMAIALQVEKTSKRGGRIIHEKDVFLPPLALSPPSIGSQ 271

Human   283 TEKDASKKSDSNP---------------LTEILKCPTKVVLLRNMVGAGEVDEDLEVETKEECE- 331
            .....|.|:...|               :|||:|.|:||||||||||.|:|||:||.|.|:||. 
  Fly   272 IGTSPSHKAMPPPQMVDTAAESGDIGYSITEIMKSPSKVVLLRNMVGPGDVDEELEPEVKDECNT 336

Human   332 KYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGRVVKACFYNLDKFRVLD 396
            |||:|...:|.|..|...::||:||:||.|:|||||||||||||:||||.|:|.|||.|||:...
  Fly   337 KYGEVNSVIIHESFGTVPEDAVKIFVEFRRIESAIKAVVDLNGRFFGGRQVRAGFYNYDKFKCFQ 401

Human   397 L 397
            |
  Fly   402 L 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RBM17NP_116294.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 57..84 4/26 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..233 25/138 (18%)
G-patch 235..279 CDD:396249 31/59 (53%)
RRM_UHM_SPF45 303..397 CDD:410051 60/94 (64%)
Spf45NP_001036426.1 G-patch 209..248 CDD:396249 28/77 (36%)
RRM_UHM_SPF45 307..402 CDD:410051 60/94 (64%)

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