DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FRMD5 and frmd5a

DIOPT Version :10

Sequence 1:NP_116281.2 Gene:FRMD5 / 84978 HGNCID:28214 Length:570 Species:Homo sapiens
Sequence 2:XP_699526.3 Gene:frmd5a / 570903 ZFINID:ZDB-GENE-050419-226 Length:576 Species:Danio rerio


Alignment Length:575 Identity:494/575 - (85%)
Similarity:527/575 - (91%) Gaps:7/575 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MLSRLMSGSSRSLEREYSCTVRLLDDSEYTCTIQRDAKGQYLFDLLCHHLNLLEKDYFGIRFVDP 65
            |||||||||.|:|||||.||||||||:||||||||||||||||||:|||||||||||||||:|||
Zfish     2 MLSRLMSGSVRNLEREYMCTVRLLDDTEYTCTIQRDAKGQYLFDLICHHLNLLEKDYFGIRYVDP 66

Human    66 DKQRHWLEFTKSVVKQLRSQPPFTMCFRVKFYPADPAALKEEITRYLVFLQIKRDLYHGRLLCKT 130
            ||||||||||||:.||::||||||||.||||||.|||||||||||||||||||||||||||||||
Zfish    67 DKQRHWLEFTKSISKQMKSQPPFTMCLRVKFYPPDPAALKEEITRYLVFLQIKRDLYHGRLLCKT 131

Human   131 SDAALLAAYILQAEIGDYDSGKHPEGYSSKFQFFPKHSEKLERKIAEIHKTELSGQTPATSELNF 195
            ||||:||||||||||||||.|||||||||||||||||||||||:|||||||||.||||.||||.|
Zfish   132 SDAAMLAAYILQAEIGDYDPGKHPEGYSSKFQFFPKHSEKLERRIAEIHKTELIGQTPETSELKF 196

Human   196 LRKAQTLETYGVDPHPCKDVSGNAAFLAFTPFGFVVLQGNKRVHFIKWNEVTKLKFEGKTFYLYV 260
            |:|||.|||||||||||||||||.|||||||||||||||||||||:|||||||||||||||::|.
Zfish   197 LQKAQMLETYGVDPHPCKDVSGNPAFLAFTPFGFVVLQGNKRVHFLKWNEVTKLKFEGKTFHIYA 261

Human   261 SQKEEKKIILTYFAPTPEACKHLWKCGIENQAFYKLEKSSQVRTVSSSNLFFKGSRFRYSGRVAK 325
            :|||:||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||
Zfish   262 NQKEDKKIILTYFAPTPEACKHLWKCGVENQAFYKLEKSSQVRTVSSSNLFFKGSRFRYSGRVAK 326

Human   326 EVMESSAKIKREPPEIHRAGMVPSRSCPSITHGPRLSSVPRTRRRAVHISIMEGLESLRDSAHST 390
            ||||.|||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||
Zfish   327 EVMEQSAKIKREPPEIHRAGLVPSRSCPSITHGPRLSSVPRTRRRAVHISIMEGLESLRDSAHST 391

Human   391 PVRSTSHGDTFLPHVRSSRTDSNERVAVIADEAYSPADSVLPTPVAEHSLELMLLSRQINGATCS 455
            ||||.||||:|:|..||..|||.:|.|:|:||:|||:||||||||||||||| .:|||||||.||
Zfish   392 PVRSVSHGDSFMPRSRSQMTDSGDRTAIISDESYSPSDSVLPTPVAEHSLEL-AVSRQINGAPCS 455

Human   456 IEEEKESEASTPTATEVEALGGELRAL----CQGHSGP--EEEQVNKFVLSVLRLLLVTMGLLFV 514
            |||||||||.||:..:|...|.:.||.    ..|...|  |.|||||||||||||||||:|||||
Zfish   456 IEEEKESEAGTPSVGDVAEFGADSRAAGPMQIAGREAPLSEAEQVNKFVLSVLRLLLVTIGLLFV 520

Human   515 LLLLLIILTESDLDIAFFRDIRQTPEFEQFHYQYFCPLRRWFACKIRSVVSLLID 569
            ||||||:||||||||||.||||||||||||||:||||||||||||:|.|..|||:
Zfish   521 LLLLLIVLTESDLDIAFLRDIRQTPEFEQFHYEYFCPLRRWFACKLRWVGGLLIN 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FRMD5NP_116281.2 B41 19..210 CDD:214604 173/190 (91%)
FERM_C_FRMD3_FRMD5 191..295 CDD:270013 92/103 (89%)
Interaction with ROCK1. /evidence=ECO:0000269|PubMed:25448675 308..353 42/44 (95%)
FA 309..354 CDD:462582 42/44 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..367 21/22 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..407 16/21 (76%)
frmd5aXP_699526.3 B41 19..211 CDD:214604 173/191 (91%)
PH-like 192..296 CDD:473070 92/103 (89%)
FA 310..355 CDD:462582 42/44 (95%)

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