DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXL20 and CG15056

DIOPT Version :10

Sequence 1:NP_001357137.2 Gene:FBXL20 / 84961 HGNCID:24679 Length:438 Species:Homo sapiens
Sequence 2:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster


Alignment Length:262 Identity:60/262 - (22%)
Similarity:97/262 - (37%) Gaps:88/262 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   156 TSITNMSLKALSEGCPL-------------LEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGC 207
            ||.:|::..:|.. |.|             ||.|::.:.|::|...:.:|..   .|.:|::.||
  Fly   128 TSFSNLTYVSLRR-CQLNDENLVGWEFLTHLETLDLRYNDRLTGSCLMSLPT---SLLSLYITGC 188

Human   208 TQLEDEALKYI----------------GAH----------CPELVTLNLQTCLQITDEGLITICR 246
            ..|....|.::                |.|          ||.||.:.:..|....||..:...|
  Fly   189 RNLCPNQLIFLNRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEISICSLNRDEYRLGELR 253

Human   247 GCHKLQSLCASGCS------NITDAIL----------NALGQNCP----------------RLRI 279
               .||||.....|      .::|.:|          |.:..:.|                :||:
  Fly   254 ---YLQSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGFVSANALSIISRFRQLRV 315

Human   280 LEVA----RCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSHCELI 340
            |::.    |.:.|..:      ||...||.:||.....||:..:|:|.|..|.|.||.:..|.|:
  Fly   316 LKMPNQPYRPNDLLRL------RNLTFLETLDLSNSPYITNEVVIELVIGIPNLSVLIVQGCPLL 374

Human   341 TD 342
            |:
  Fly   375 TN 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXL20NP_001357137.2 F-box_FBXL2-like 24..68 CDD:438887
leucine-rich repeat 67..94 CDD:275381
AMN1 95..291 CDD:187754 42/209 (20%)
leucine-rich repeat 95..114 CDD:275381
leucine-rich repeat 121..146 CDD:275381
leucine-rich repeat 147..172 CDD:275381 5/15 (33%)
leucine-rich repeat 173..198 CDD:275381 6/24 (25%)
leucine-rich repeat 199..224 CDD:275381 9/50 (18%)
AMN1 222..396 CDD:187754 40/157 (25%)
leucine-rich repeat 225..250 CDD:275381 6/24 (25%)
leucine-rich repeat 251..276 CDD:275381 9/56 (16%)
leucine-rich repeat 277..302 CDD:275381 7/28 (25%)
leucine-rich repeat 303..328 CDD:275381 9/24 (38%)
leucine-rich repeat 329..357 CDD:275381 6/14 (43%)
leucine-rich repeat 358..382 CDD:275381
leucine-rich repeat 383..408 CDD:275381
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 3/23 (13%)
leucine-rich repeat 157..179 CDD:275381 6/24 (25%)
leucine-rich repeat 180..204 CDD:275381 6/23 (26%)
leucine-rich repeat 205..231 CDD:275381 3/25 (12%)
leucine-rich repeat 232..285 CDD:275381 13/55 (24%)
leucine-rich repeat 286..326 CDD:275381 6/39 (15%)
AMN1 306..>376 CDD:187754 22/75 (29%)
leucine-rich repeat 337..362 CDD:275381 9/24 (38%)
Blue background indicates that the domain is not in the aligned region.

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