DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CGNL1 and Prm

DIOPT Version :9

Sequence 1:XP_005254783.1 Gene:CGNL1 / 84952 HGNCID:25931 Length:1303 Species:Homo sapiens
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:885 Identity:207/885 - (23%)
Similarity:379/885 - (42%) Gaps:187/885 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   509 RATATSPDSGAKKISVKTFPSASNTQATPDL-------LKGQQELTQQTNEETAK---QILYNYL 563
            |||:|.|  |...::::.....|:.....|.       |:.::||.|:...|.|.   |::....
  Fly    15 RATSTGP--GTADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSE 77

Human   564 K----EGSTDNDDATKRKVNLVFEKIQTLKSRAAGSAQGNNQACNSTSEVKDLLEQKSKLTIEVA 624
            :    ||..::.....||.:....|::.|.           :..:..||...||.:|....| :.
  Fly    78 RLEEAEGGAEHQFEANRKRDAELLKLRKLL-----------EDVHLESEETTLLLKKKHNEI-IT 130

Human   625 ELQRQLQLEVKNQQNIKEERERMRANLEELRSQ----HNEKVEENSTLQQRLEESEGELRKNLEE 685
            :.|.|:::..||:...::::.:.:..:.||.||    :.||:.....: .:||.|..||...:||
  Fly   131 DFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHI-SKLEVSISELNVKIEE 194

Human   686 LFQVKMEREQHQT-----------EIRDLQDQL-------SEMHDELDSAKR---SEDREKGALI 729
            |.:..::...|::           :::||:.||       |::..:|:.|:|   .|||.:..|.
  Fly   195 LNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLE 259

Human   730 EELLQAKQDLQDLLIAKEEQEDLLRKREREL-------TALKGALKEEVSSHDQEMDKLKEQYDA 787
            ..|.|.:.:|..:....||:.:.....||:|       |:.:.....||::..:|:::::.:|..
  Fly   260 SSLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQV 324

Human   788 ELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQI 852
            .:..|.|       ::|.|..:.|..|:.:......|::|..:.||......||.:.|..|::..
  Fly   325 RITELEE-------HIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHN 382

Human   853 EDLKGDEAKAKETLKKYEGEIRQLEEALVHARKEEKEAVSARRALENELEAAQGNLSQTTQEQKQ 917
            .:||   ::..||:..||...|.|         :.|.|...|..  :||:..:.|.:|.|:|.|:
  Fly   383 VELK---SRLDETIILYETSQRDL---------KNKHADLVRTV--HELDKVKDNNNQLTRENKK 433

Human   918 LSEKLKEESEQKEQLRRLKNEMENERWHLGKTIEKLQKEMADI------VEASRTSTLE----LQ 972
            |.:.|.|......:|.|..:|:|.|       :.:|:.|..::      .||.|.:..:    |.
  Fly   434 LGDDLHEAKGAINELNRRLHELELE-------LRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491

Human   973 NQLDEYKEKNRRELAEMQ--------------RQLKEKTLEAE---KSRLTAMKMQDEMRLMEEE 1020
            ...::|:....|.|||..              .||..:.:|||   |:.:|.:|.:.::::.|.|
  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556

Human  1021 L------------------------------RDYQRAQDEALTKRQLLEQTLKDLEYEL-EAKSH 1054
            :                              .|.||.....|.:..:.::.|..|..|| |.:||
  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621

Human  1055 LKDDRSRLVKQMEDKV---------------------SQLEMELEEERNNSDLLSE--RISRSRE 1096
            | |..:|..:.:|.:.                     |:||.||....::.:.:|:  |||..|.
  Fly   622 L-DSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERY 685

Human  1097 Q---------MEQLRNELLQERAARQDLECDKISLERQNKDLKSRIIHLEGSYRSSKEGLVVQME 1152
            |         :||:..|  |||..:  ||..|.|||.:.|:|..|:..:|.:..:..:.::.::|
  Fly   686 QKVQVELKHVVEQVHEE--QERIVK--LETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLE 746

Human  1153 ARIAELEDRLESEERDRANLQLSNRRLERKVKELVMQVDDEH---LSLTDQKDQLSLRLKAMKRQ 1214
            |||.:||..||.|:|..|......|:.||.|||:::|.:::.   :.|.|..|:.:.::...:||
  Fly   747 ARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQ 811

Human  1215 VEEAEEEIDRLESSKKKLQRELEEQMDMNEHLQGQLNSMK 1254
            :.|.|....:..:..::.|||||...|..:..:..||.::
  Fly   812 LSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIR 851

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CGNL1XP_005254783.1 Taxilin 608..943 CDD:286771 88/366 (24%)
SPEC 694..>856 CDD:295325 40/189 (21%)
DUF4200 839..924 CDD:290574 24/84 (29%)
Tropomyosin 843..1089 CDD:278679 69/324 (21%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 201/864 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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