DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF587 and LOC100488006

DIOPT Version :9

Sequence 1:NP_116217.1 Gene:ZNF587 / 84914 HGNCID:30955 Length:575 Species:Homo sapiens
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 -ID:- Length:383 Species:Xenopus tropicalis


Alignment Length:337 Identity:142/337 - (42%)
Similarity:186/337 - (55%) Gaps:48/337 - (14%)


- Green bases have known domain annotations that are detailed below.


Human   176 GKDVLPSSGLCQEEAAVE----------------KTDSETMH--------GPPFQEGKTNYSCGK 216
            |.:::.:.|..|:||.::                |...|.:|        .....|.|.::...|
 Frog    56 GANLMVAGGFDQQEAEIKEYFIENPGNRAKFRINKATWENIHKGSESSENSLDESESKMDFGVQK 120

Human   217 RTKAFSTKHSVIPHQKLFTRDGCYVCSDCGKSFSRYVS-FSNHQRDHTAKGPYDCGECGKSYSRK 280
            |                     | ||.|||:||| ||| ...|:|.||.:.|::||.|||.::||
 Frog   121 R---------------------C-VCIDCGRSFS-YVSHLIIHRRSHTGEKPFECGMCGKCFARK 162

Human   281 SSLIQHQRVHTGQTAYPCEECGKSFSQKGSLISHQLVHTGEGPYECRECGKSFGQKGNLIQHQQG 345
            .||:.|:|:|||:..|||.:|||.|:...:|.:|:.:||||.||.|.||||||....:|..|.:.
 Frog   163 CSLVIHERIHTGERPYPCPDCGKRFTSSATLTTHKRIHTGERPYICWECGKSFTSNSSLFLHNRT 227

Human   346 HTGERAYHCGECGKSFRQKFCFINHQRVHTGERPYKCGECGKSFGQKGNLVHHQRGHTGERPYEC 410
            ||||:.|.|.:|||:|......:.|.|.||||:||.|.||||||.....|:.||..||||..|.|
 Frog   228 HTGEKPYECKQCGKTFSCSSALVTHTRTHTGEKPYTCAECGKSFFDNSRLLKHQATHTGEWAYMC 292

Human   411 KECGKSFRYRSHLTEHQRLHTGERPYNCRECGKLFNRKYHLLVHERVHTGERPYACEVCGKLFGN 475
            ..|||.|...|:|..|||.||||||::|.:|||.|....:|:.|:..|||||||.|.:|||.|..
 Frog   293 TICGKGFTCISNLNVHQRSHTGERPFSCGQCGKSFTNNSYLVRHQTTHTGERPYPCPICGKTFTR 357

Human   476 KHSVTIHQRIHT 487
            |..|..||:|||
 Frog   358 KGHVVTHQKIHT 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF587NP_116217.1 KRAB 15..70 CDD:214630
KRAB 15..54 CDD:279668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..88
C2H2 Zn finger 94..114 CDD:275368
C2H2 Zn finger 122..142 CDD:275368
C2H2 Zn finger 242..262 CDD:275368 12/20 (60%)
C2H2 Zn finger 270..290 CDD:275368 11/19 (58%)
COG5048 <273..568 CDD:227381 111/215 (52%)
C2H2 Zn finger 298..318 CDD:275368 7/19 (37%)
C2H2 Zn finger 326..343 CDD:275368 8/16 (50%)
C2H2 Zn finger 354..374 CDD:275368 7/19 (37%)
zf-H2C2_2 369..389 CDD:290200 13/19 (68%)
C2H2 Zn finger 382..402 CDD:275368 10/19 (53%)
zf-H2C2_2 394..419 CDD:290200 13/24 (54%)
C2H2 Zn finger 410..430 CDD:275368 10/19 (53%)
zf-H2C2_2 422..447 CDD:290200 15/24 (63%)
C2H2 Zn finger 438..458 CDD:275368 7/19 (37%)
zf-H2C2_2 450..473 CDD:290200 13/22 (59%)
C2H2 Zn finger 466..486 CDD:275368 9/19 (47%)
zf-H2C2_2 478..503 CDD:290200 6/10 (60%)
C2H2 Zn finger 494..514 CDD:275368
zf-H2C2_2 509..530 CDD:290200
C2H2 Zn finger 522..542 CDD:275368
zf-H2C2_2 534..557 CDD:290200
C2H2 Zn finger 550..570 CDD:275368
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368 12/20 (60%)
zf-H2C2_2 136..161 CDD:290200 10/24 (42%)
C2H2 Zn finger 152..172 CDD:275368 11/19 (58%)
zf-H2C2_2 164..189 CDD:290200 14/24 (58%)
COG5048 <177..327 CDD:227381 77/149 (52%)
C2H2 Zn finger 180..200 CDD:275368 7/19 (37%)
zf-H2C2_2 193..217 CDD:290200 15/23 (65%)
C2H2 Zn finger 208..228 CDD:275368 9/19 (47%)
zf-H2C2_2 220..245 CDD:290200 12/24 (50%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
zf-H2C2_2 248..271 CDD:290200 13/22 (59%)
C2H2 Zn finger 264..284 CDD:275368 10/19 (53%)
C2H2 Zn finger 292..312 CDD:275368 10/19 (53%)
zf-H2C2_2 304..329 CDD:290200 15/24 (63%)
C2H2 Zn finger 320..340 CDD:275368 7/19 (37%)
zf-H2C2_2 332..357 CDD:290200 14/24 (58%)
C2H2 Zn finger 348..368 CDD:275368 9/19 (47%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.