DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZSCAN10 and ehn-3

DIOPT Version :9

Sequence 1:NP_116194.2 Gene:ZSCAN10 / 84891 HGNCID:12997 Length:780 Species:Homo sapiens
Sequence 2:NP_001023615.1 Gene:ehn-3 / 191363 WormBaseID:WBGene00001223 Length:262 Species:Caenorhabditis elegans


Alignment Length:123 Identity:39/123 - (31%)
Similarity:59/123 - (47%) Gaps:11/123 - (8%)


- Green bases have known domain annotations that are detailed below.


Human   664 CDTCGHRFRNSSNLARHRRSHTGERPYSCQTCGRSFRRNAHLRRHLATHAEPGQEQAEPPQEC-- 726
            ||.|..:|.|.:||.||:..|:|::.:.||.|.|.|.||..::.|:.||.:.|.     ..||  
 Worm     4 CDICHQKFSNKTNLNRHKVMHSGKKKFECQFCRRPFFRNDRMKEHMMTHIKKGN-----TFECPI 63

Human   727 VECGKSFSRSCNLLRHL---LVHTGARPYSCTQCGRSFSRNSHLLRHLRT-HARETLY 780
            ..|...|:...:|..|:   .:..|:.|..|..|.:.|:.:..||.|..| |...|.:
 Worm    64 TACNSKFNSFTSLQFHVDSEHIIRGSSPAKCKSCIKWFNSSHRLLLHFHTAHLDHTKF 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZSCAN10NP_116194.2 SCAN 40..124 CDD:153421
PHA03418 156..>314 CDD:177646
C2H2 Zn finger 349..370 CDD:275368
C2H2 Zn finger 378..398 CDD:275368
zf-H2C2_2 391..415 CDD:290200
COG5048 400..774 CDD:227381 37/115 (32%)
C2H2 Zn finger 406..426 CDD:275368
C2H2 Zn finger 434..454 CDD:275368
C2H2 Zn finger 478..498 CDD:275368
zf-C2H2 522..544 CDD:278523
C2H2 Zn finger 524..544 CDD:275368
zf-H2C2_2 536..561 CDD:290200
C2H2 Zn finger 552..572 CDD:275368
zf-H2C2_2 565..589 CDD:290200
C2H2 Zn finger 580..600 CDD:275368
zf-H2C2_2 592..615 CDD:290200
C2H2 Zn finger 608..628 CDD:275368
zf-H2C2_2 620..645 CDD:290200
C2H2 Zn finger 636..656 CDD:275368
zf-H2C2_2 648..673 CDD:290200 4/8 (50%)
C2H2 Zn finger 664..684 CDD:275368 9/19 (47%)
zf-H2C2_2 676..701 CDD:290200 11/24 (46%)
C2H2 Zn finger 692..712 CDD:275368 8/19 (42%)
C2H2 Zn finger 728..746 CDD:275368 4/20 (20%)
zf-H2C2_2 738..763 CDD:290200 7/27 (26%)
zf-C2H2 752..774 CDD:278523 7/22 (32%)
C2H2 Zn finger 754..774 CDD:275368 7/20 (35%)
ehn-3NP_001023615.1 C2H2 Zn finger 4..24 CDD:275368 9/19 (47%)
C2H2 Zn finger 32..52 CDD:275368 8/19 (42%)
C2H2 Zn finger 61..80 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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