DRSC/TRiP Functional Genomics Resources

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Protein Alignment CBR4 and rdhB

DIOPT Version :10

Sequence 1:XP_006714454.1 Gene:CBR4 / 84869 HGNCID:25891 Length:247 Species:Homo sapiens
Sequence 2:NP_651024.1 Gene:rdhB / 42614 FlyBaseID:FBgn0038946 Length:248 Species:Drosophila melanogaster


Alignment Length:247 Identity:58/247 - (23%)
Similarity:107/247 - (43%) Gaps:42/247 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 DKVCAVFGGSRGIGRAVAQLMARKGYRLAVIARNLEGAKAAAGDLGGDHLAFS--CDVAKEHDVQ 64
            :||..|.|.|.|||...|..:|..|..:..:||.:|..:|....:.|....|:  ||:..|..:.
  Fly     9 NKVAVVTGASVGIGATTAIELANAGMVVVGLARRVELIEALRDQVTGVGKIFARQCDLNDEEQLA 73

Human    65 NTFEELEKHLGRVNFLVNAAGINRDGLLVRTKTEDMVSQLHTNLLGSMLTCKAAMRTM--IQQQG 127
            :.|..:.:....::.|:..|||.:...|..:.|:|:.....||::.:....:.|::.|  ::.:|
  Fly    74 SAFNWIREKFQAIHVLICNAGILKANFLSESPTKDIKELFDTNVVATASCLREALKHMAAVKVRG 138

Human   128 GSIVN---VGHRREMLLHKRSIVGLKGNSGQSVYSASKGGLVGFSRALAKEV--ARKKIRVNVVA 187
            ..:|.   :|||...:     .|.|     .|||.|:|..:....:.:.:|:  .:..|::..:.
  Fly   139 HIVVMNSVLGHRIPEV-----PVPL-----FSVYPATKHAITALCQTVRQEIHFLKLNIKLTSIC 193

Human   188 PGFVHTDMTKDLKEEHLKKNIPLGRFGETI---------EVAHAVVFLLESP 230
            ||.|.||.              |..:.:.:         :||.||::.|.:|
  Fly   194 PGMVDTDF--------------LSVYSQAVAELPKLQARDVAKAVLYALNTP 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CBR4XP_006714454.1 Rossmann-fold NAD(P)(+)-binding proteins 3..243 CDD:473865 58/246 (24%)
rdhBNP_651024.1 Mgc4172-like_SDR_c 4..244 CDD:187601 58/247 (23%)

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