DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMEM25 and ttc-36

DIOPT Version :9

Sequence 1:XP_005271760.1 Gene:TMEM25 / 84866 HGNCID:25890 Length:382 Species:Homo sapiens
Sequence 2:NP_496168.1 Gene:ttc-36 / 174562 WormBaseID:WBGene00009947 Length:179 Species:Caenorhabditis elegans


Alignment Length:105 Identity:25/105 - (23%)
Similarity:44/105 - (41%) Gaps:32/105 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   201 SLAHNLSV--------VATNDVGVT-----SASLPAPGL-LATRVEVPLLGIVVAAGLALGTLVG 251
            |.:|:.:|        :.|:|.|:.     |.||..||. |:.::|..  |:.:|.|:.|...: 
 Worm     2 STSHDRAVLNQILNPLMPTSDSGIAEIHLESDSLEHPGYELSLQLERE--GVALAEGVRLDEAI- 63

Human   252 FSTLVACLVCRKEKKTKGPS---RHPSLISSDSNNLKLNN 288
                        ||.||...   ::||..::.:...:|.|
 Worm    64 ------------EKFTKALEVCPKNPSAYNNRAQAYRLQN 91

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM25XP_005271760.1 Ig 27..118 CDD:299845
ttc-36NP_496168.1 TPR_11 43..107 CDD:290150 13/64 (20%)
TPR repeat 46..71 CDD:276809 9/39 (23%)
TPR_11 76..144 CDD:290150 4/16 (25%)
TPR repeat 76..106 CDD:276809 4/16 (25%)
TPR_1 77..106 CDD:278916 4/15 (27%)
TPR repeat 115..143 CDD:276809
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4555
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.