| Sequence 1: | NP_116126.3 | Gene: | LMNB2 / 84823 | HGNCID: | 6638 | Length: | 620 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001260974.1 | Gene: | LamC / 36615 | FlyBaseID: | FBgn0010397 | Length: | 640 | Species: | Drosophila melanogaster |
| Alignment Length: | 583 | Identity: | 219/583 - (37%) |
|---|---|---|---|
| Similarity: | 336/583 - (57%) | Gaps: | 55/583 - (9%) |
- Green bases have known domain annotations that are detailed below.
|
Human 19 ATMATPLPGRAG----GPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKIS 79
Human 80 EKEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREGELTV 144
Human 145 AQGRVKDLESLFHRSEVELAAALSDKRGLESDVAE-------LRAQLAKAEDGHAVAKKQLEKET 202
Human 203 LMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQH 267
Human 268 DEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQLSGLQKQASAAE 332
Human 333 DRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEG 397
Human 398 EEERLKL-SP----------SPSSRVTVSRATSSSSGSLSATGRLGRS---------KRKRLEVE 442
Human 443 EPLGSGPSVLGTGTGGSGGFHLAQQASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQV 507
Human 508 LEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGE 570 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LMNB2 | NP_116126.3 | Head | 1..48 | 14/32 (44%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..38 | 6/22 (27%) | |||
| Filament | 45..401 | CDD:278467 | 146/362 (40%) | ||
| Coil 1A | 49..83 | 19/33 (58%) | |||
| Linker 1 | 84..95 | 4/10 (40%) | |||
| Coil 1B | 96..229 | 56/139 (40%) | |||
| Linker 2 | 230..256 | 7/25 (28%) | |||
| Coil 2 | 257..400 | 52/142 (37%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 399..464 | 21/84 (25%) | |||
| Tail | 401..620 | 61/190 (32%) | |||
| Nuclear localization signal. /evidence=ECO:0000255 | 435..440 | 3/4 (75%) | |||
| LTD | 467..576 | CDD:279300 | 41/104 (39%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 581..620 | ||||
| LamC | NP_001260974.1 | Filament | 45..401 | CDD:278467 | 146/362 (40%) |
| ATP-synt_B | <67..>142 | CDD:304375 | 32/74 (43%) | ||
| MreC | <178..>224 | CDD:302802 | 26/52 (50%) | ||
| LTD | 473..574 | CDD:279300 | 41/104 (39%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 270 | 1.000 | Domainoid score | I1835 |
| eggNOG | 1 | 0.900 | - | - | E1_KOG0977 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H7818 | |
| Inparanoid | 1 | 1.050 | 398 | 1.000 | Inparanoid score | I1952 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 1 | 1.010 | - | - | QHG48052 | |
| OrthoDB | 1 | 1.010 | - | - | D204815at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001052 | |
| OrthoInspector | 1 | 1.000 | - | - | mtm8670 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103212 | |
| Panther | 1 | 1.100 | - | - | O | PTHR45721 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2618 |
| SonicParanoid | 1 | 1.000 | - | - | X632 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.910 | |||||