| Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_572285.2 | Gene: | Grip / 50391 | FlyBaseID: | FBgn0029830 | Length: | 1058 | Species: | Drosophila melanogaster |
| Alignment Length: | 709 | Identity: | 162/709 - (22%) |
|---|---|---|---|
| Similarity: | 252/709 - (35%) | Gaps: | 205/709 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Human 122 HHFQTSCKGASHYGLTKDR---KRRSQDG--CPD-GCASLTATAPSPEVSAAATISLMTDEPGLD 180
Human 181 NPAYVSSAEDGQPAISPVDSGRSNRTRARPFER-------STIRSRSFKKINRALSVLRRTKSGS 238
Human 239 AVANHADQGRENSENTTAPEVFPRLYHLIPDGEITSIKINRVDPSESLSIRLVGGSETPLVHIII 303
Human 304 QHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCQVLWLT---------VMREQ 359
Human 360 KFRSRNNGQAP---DAYRPRDDSFHVIL------------NKSSPEEQLGIKLVRKVDE-PGVFI 408
Human 409 FNVLDGGVAYRHGQLEENDRVLAINGHDLRYG--SPESAAHLIQAS----------------ERR 455
Human 456 VHLVV---------------SRQVRQRSPDIFQEAGWNSN------GSWSPGPGERSNTPKPLHP 499
Human 500 TIT-------CHEKVVNIQKDPGESLGM----TVAG-GASHREWDLPIYVISVEPGGVISRDGRI 552
Human 553 KTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALEVKEYEPQEDCSSPAALDSNHNMAPPS 617
Human 618 DWSPSWVMWLEL------PRCLYNCKDI----VLRRNTAGSLGFCIVGGYEEYNGNKPFFIKSIV 672
Human 673 EGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARLLKELKGR-----------ITLTI 720 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
| modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 10/42 (24%) | |||
| NPXY motif | 181..184 | 1/2 (50%) | |||
| Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 14/64 (22%) | |||
| PDZ_signaling | 272..355 | CDD:238492 | 22/91 (24%) | ||
| PDZ_signaling | 380..460 | CDD:238492 | 24/110 (22%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 4/24 (17%) | |||
| PDZ_signaling | 505..588 | CDD:238492 | 18/87 (21%) | ||
| PDZ_signaling | 637..721 | CDD:238492 | 31/99 (31%) | ||
| Grip | NP_572285.2 | PDZ | 82..147 | CDD:294084 | 21/77 (27%) |
| PDZ_signaling | 183..254 | CDD:238492 | 20/75 (27%) | ||
| PDZ_signaling | 278..375 | CDD:238492 | 25/102 (25%) | ||
| PDZ | 496..>521 | CDD:294084 | 9/40 (23%) | ||
| PDZ_signaling | 571..658 | CDD:238492 | 31/97 (32%) | ||
| PDZ_signaling | 832..913 | CDD:238492 | |||
| PDZ_signaling | 973..1055 | CDD:238492 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||