| Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001014543.1 | Gene: | a / 43852 | FlyBaseID: | FBgn0000008 | Length: | 1329 | Species: | Drosophila melanogaster |
| Alignment Length: | 781 | Identity: | 152/781 - (19%) |
|---|---|---|---|
| Similarity: | 252/781 - (32%) | Gaps: | 247/781 - (31%) |
- Green bases have known domain annotations that are detailed below.
|
Human 110 HCTQVLQRCDLEHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATAPSPEVSAAATISLMT 174
Human 175 DEPGLD-NPAY------VSSAEDGQPAISPVDSGR-SNRTRARPFERSTIRSRSFKKINRALSVL 231
Human 232 RRTKSGSAVANHADQGRENSENT---TAP------------EVFPRLYHLIPDGEITSIKINRVD 281
Human 282 PSESLSIRL------VGGSETPLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYA 340
Human 341 V-RLLR---QPC--------QVLWLT--------------------VMREQKFRSRNNGQAPDAY 373
Human 374 RPRDDSFHVILNKSSPEEQLGIKLVRKVDEPGVFIFNVLDGGVAYRHGQLEENDRVLAINGHDLR 438
Human 439 YGSPESAAHLIQASERRVHLVVSRQVRQRSPDIFQEAGWNSNGSWSPGPGERS--NTPKPLHP-- 499
Human 500 TITC----HEKVVNIQKDP------------GESLGMTVAGG-ASHREWDLPI-------YVISV 540
Human 541 EPG-----------------------GVISRDGRIKTGDILLNV----------DGVELTEVSRS 572
Human 573 EAVALL----------KRTSSSIVLK--ALEVKEYEPQ---EDCSSPAALDSN----HNMAPPS- 617
Human 618 ---DWSPSWVMWLELPRCLYNCKD----IVLRRNTA-------------------GSLGFCIVGG 656
Human 657 YEEYNGNKPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARLLKELK-GRITLTI 720
Human 721 V 721 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
| modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 9/43 (21%) | |||
| NPXY motif | 181..184 | 1/2 (50%) | |||
| Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 12/58 (21%) | |||
| PDZ_signaling | 272..355 | CDD:238492 | 24/120 (20%) | ||
| PDZ_signaling | 380..460 | CDD:238492 | 11/79 (14%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 3/20 (15%) | |||
| PDZ_signaling | 505..588 | CDD:238492 | 18/145 (12%) | ||
| PDZ_signaling | 637..721 | CDD:238492 | 32/107 (30%) | ||
| a | NP_001014543.1 | PDZ_signaling | 775..865 | CDD:238492 | 22/98 (22%) |
| PDZ_signaling | 1230..1317 | CDD:238492 | 29/86 (34%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR19964 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.000 | |||||