DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LNX1 and Zasp67

DIOPT Version :9

Sequence 1:NP_001119800.1 Gene:LNX1 / 84708 HGNCID:6657 Length:728 Species:Homo sapiens
Sequence 2:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster


Alignment Length:403 Identity:82/403 - (20%)
Similarity:137/403 - (33%) Gaps:119/403 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   272 ITSIKINRVDPSESLSIRLVGGS--ETPLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISN 334
            :..||:.|.| :.....|||||:  :.||..:.:    .:|.||.:..|...|||:::|....:.
  Fly     2 VLDIKMCRFD-NVPWGFRLVGGADYDYPLTVVKV----TEGSIADEAGLRVEDIIVRINDTAATP 61

Human   335 VPHNYAVRLLRQPCQVLWLTVMREQKFRSRNNGQAPDAYR-----PRDDSFHVILNKS-----SP 389
            :.|:.|.||:.....|.:..|.||.:         .|||.     |..:.   .|.||     ||
  Fly    62 LTHDEAHRLIMGSGSVFYFGVYRENE---------EDAYECLKKFPTSEG---SLTKSPMPTISP 114

Human   390 E-----EQLGIKLVRKVDEPGVFIFNVLDGGVAYRHGQLEENDRVLAINGHDLRYGSP---ESAA 446
            .     .||......:..||..|:                                 |   |.||
  Fly   115 SPTPSLSQLTETTNARTPEPEPFV---------------------------------PLPRELAA 146

Human   447 HLIQASERRVHLVVSRQVRQRSPDIF-QEAGWNSNGSWSPGPGERSNTP--------KPLHPTIT 502
            ..:.|....|.:.|..:.||...::. :|...:.||..:||..:....|        .|..|...
  Fly   147 ATMAAPAVEVDVDVLAECRQPMSEVHSEEKRGDVNGHDAPGQADEGGLPVENLYLPDLPDRPCSA 211

Human   503 CHE----KVVNIQKDPGESLGMTVAGGA----SHREWDLPIYVISVEPGGVISRDGRIKTGDILL 559
            ..|    |:|.      |.:...::|.:    .|....:..|.|..:||..:|       .|:|.
  Fly   212 LSERQEIKLVE------EEIAAVLSGESEVLKEHNVLGVNFYRIFPKPGVCMS-------SDVLR 263

Human   560 NVD------GVELTEVSRSEAVAL------LKRTSSSIVLKALEVKEYE-------PQEDCSSPA 605
            :::      .:|..:.:|..:..|      :.::..|:..:......|:       |:|....|.
  Fly   264 SLNEEVTKTKLEKDKENRQWSTFLQRPNRPVPKSKQSLEAERRAANAYKVTIVKSAPREKSPMPE 328

Human   606 ALDSNHNMAPPSD 618
            |..:.....||.:
  Fly   329 AKPAPKEATPPKE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LNX1NP_001119800.1 mRING-HC-C3HC3D_LNX1 38..79 CDD:319693
modified RING-HC finger (C3HC3D-type) 41..78 CDD:319693
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..214
NPXY motif 181..184
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 186..244
PDZ_signaling 272..355 CDD:238492 24/84 (29%)
PDZ_signaling 380..460 CDD:238492 16/92 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..494 4/18 (22%)
PDZ_signaling 505..588 CDD:238492 17/102 (17%)
PDZ_signaling 637..721 CDD:238492
Zasp67NP_648358.2 PDZ_signaling 2..75 CDD:238492 23/77 (30%)
DUF4749 653..>699 CDD:292558
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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