| Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001261340.1 | Gene: | Fife / 38337 | FlyBaseID: | FBgn0264606 | Length: | 1314 | Species: | Drosophila melanogaster |
| Alignment Length: | 782 | Identity: | 133/782 - (17%) |
|---|---|---|---|
| Similarity: | 226/782 - (28%) | Gaps: | 305/782 - (39%) |
- Green bases have known domain annotations that are detailed below.
|
Human 116 QRCDLEHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATAPSPEVSAAATISLMTDEPGL- 179
Human 180 ----------DNPAYVSSAEDGQPAISPVDSGRSNRT----------------RARPFERS---T 215
Human 216 IRSRSFK-----------------------KINR-------ALSVLRRTKSGSAVA--------- 241
Human 242 -----------NHADQGRENSENTTAPE-----VFPRLYHLIPDGEITSIKINRVD--------- 281
Human 282 -PSESLSIRLVGGSE------TPL--------VHIIIQHIYRDGV-----------------IAR 314
Human 315 DGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCQVLWLTVMREQKFRSRNNG------QAPDAY 373
Human 374 RPRDDSFHVILNKSSPEEQLGIKLVRKVDEPGVFIFNVLDGGVAYRHGQLEENDRVLAINGHDLR 438
Human 439 YGSPESAAHLIQASERRVHLVVSRQVRQRS---PDIFQEAGWNSNGSWSPGPGERSNTPKP---- 496
Human 497 -------------------------LHPT----ITCHEKVVNIQKDPGE------SLGMTVAGGA 526
Human 527 SHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLKALE 591
Human 592 VKEYE-------------------PQEDCSSPAALDSNHNMAPPSDWSPSWVMWLELPRCLYNCK 637
Human 638 DIVLRRNTAGSLGFCIVGGYEEYNGNKPFFIKSIVEG------TPAYNDGRI-----------RC 685
Human 686 GD 687 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
| modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 8/62 (13%) | |||
| NPXY motif | 181..184 | 1/2 (50%) | |||
| Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 17/126 (13%) | |||
| PDZ_signaling | 272..355 | CDD:238492 | 17/123 (14%) | ||
| PDZ_signaling | 380..460 | CDD:238492 | 9/79 (11%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 4/18 (22%) | |||
| PDZ_signaling | 505..588 | CDD:238492 | 22/88 (25%) | ||
| PDZ_signaling | 637..721 | CDD:238492 | 11/68 (16%) | ||
| Fife | NP_001261340.1 | FYVE_BSN_PCLO | 130..187 | CDD:277290 | 10/57 (18%) |
| PDZ_signaling | 491..580 | CDD:238492 | 23/89 (26%) | ||
| DegQ | <526..577 | CDD:223343 | 14/51 (27%) | ||
| C2A_RIM1alpha | 651..779 | CDD:175997 | 10/60 (17%) | ||
| C2 | 1163..1304 | CDD:301316 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||