Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001285905.1 | Gene: | CG9014 / 34777 | FlyBaseID: | FBgn0028847 | Length: | 328 | Species: | Drosophila melanogaster |
Alignment Length: | 332 | Identity: | 74/332 - (22%) |
---|---|---|---|
Similarity: | 133/332 - (40%) | Gaps: | 68/332 - (20%) |
- Green bases have known domain annotations that are detailed below.
Human 35 VDDDLICHICLQALLDPL-DTPCGHTYCTLCLTNFLVEKDFCPMDRKPLVLQHCKKSSILVNKLL 98
Human 99 NKLLVTCPFREH-CTQVLQRCDLEHHFQTSCKGASHYGLTKDRKRRSQDGCPDGCASLTATAPSP 162
Human 163 EVSAAATISLMTDEPGLDNPAYVSSAEDGQPAISPVDSGRSNRTRARPFERSTIRSRSFKKINRA 227
Human 228 LSVLRRTKSGSAVANHADQGRENSENTTAPEVFPRLYHLIPDGEITS--IKINRVDPSESLSIRL 290
Human 291 V---GGSETPLVHIIIQHIYRD----GVIARDG-------------RLLPGDIILK----VNGMD 331
Human 332 ISNVPHN 338 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | 14/41 (34%) |
modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | 12/37 (32%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 4/35 (11%) | |||
NPXY motif | 181..184 | 0/2 (0%) | |||
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 10/57 (18%) | |||
PDZ_signaling | 272..355 | CDD:238492 | 20/93 (22%) | ||
PDZ_signaling | 380..460 | CDD:238492 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | ||||
PDZ_signaling | 505..588 | CDD:238492 | |||
PDZ_signaling | 637..721 | CDD:238492 | |||
CG9014 | NP_001285905.1 | zf-C3HC4 | 18..55 | CDD:278524 | 11/36 (31%) |
USP8_interact | 137..319 | CDD:286082 | 34/193 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0297 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |