Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_996333.4 | Gene: | PsGEF / 31224 | FlyBaseID: | FBgn0264598 | Length: | 2777 | Species: | Drosophila melanogaster |
Alignment Length: | 736 | Identity: | 145/736 - (19%) |
---|---|---|---|
Similarity: | 237/736 - (32%) | Gaps: | 210/736 - (28%) |
- Green bases have known domain annotations that are detailed below.
Human 6 SANDPEPLCAVCGQAHSLEENH---FYSYPEEVDDDLICHICLQALLDPLDTPCGHTYCTLCLTN 67
Human 68 FLVEKDFCPMDRKPLVLQHCKKSSILVNKLLNKLLVTCPFREHCTQVLQRCDLEHHFQTSCK--- 129
Human 130 ---GASHYGLTKDRKRRSQDGCPDGCASLTATAPSP---EVSAAATIS---------------LM 173
Human 174 TDE----------------PG-------------------LDNPAYVSSAEDGQPAI-------S 196
Human 197 PVDSGRSNRTRAR-----PFERSTIRSRSFKKINRALSVLRR--TK---SGSAVANHADQG---- 247
Human 248 ------RENSENTTAPEVFP-RLYH----LIPDGEITSIKINRVDPSESLSIRLVG--------- 292
Human 293 --GSE--------TPLVHIIIQHIYRDGVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQP 347
Human 348 CQVLWLTVMREQKFRSRNNGQAPDAYRPRDDSFHVILNKSSPEEQLGIKLVRKVDE----PGVFI 408
Human 409 FNVLDGGVAYRHGQLEENDRVLAINGHDLRYGSPESAAHLIQ-------ASERRVHLVVSRQVRQ 466
Human 467 RSPDIFQEAGWNSN---GSWSPGPGERSNTPKPLHPTITCHEKVVNIQKD-------PGESLGMT 521
Human 522 VAGGASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSI- 585
Human 586 -VLKALEVKEYEP--QEDCSS 603 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | 5/40 (13%) |
modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | 5/36 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 12/66 (18%) | |||
NPXY motif | 181..184 | 1/2 (50%) | |||
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 16/74 (22%) | |||
PDZ_signaling | 272..355 | CDD:238492 | 19/101 (19%) | ||
PDZ_signaling | 380..460 | CDD:238492 | 18/90 (20%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 3/21 (14%) | |||
PDZ_signaling | 505..588 | CDD:238492 | 20/91 (22%) | ||
PDZ_signaling | 637..721 | CDD:238492 | |||
PsGEF | NP_996333.4 | DUF4799 | <102..209 | CDD:292674 | |
C2 | 286..>381 | CDD:278593 | |||
PDZ_signaling | 644..716 | CDD:238492 | |||
RhoGEF | 831..1000 | CDD:295373 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |