DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LNX1 and X11L

DIOPT Version :9

Sequence 1:NP_001119800.1 Gene:LNX1 / 84708 HGNCID:6657 Length:728 Species:Homo sapiens
Sequence 2:NP_001285376.1 Gene:X11L / 252671 FlyBaseID:FBgn0026313 Length:1170 Species:Drosophila melanogaster


Alignment Length:917 Identity:171/917 - (18%)
Similarity:264/917 - (28%) Gaps:373/917 - (40%)


- Green bases have known domain annotations that are detailed below.


Human    23 LEEN------HFYSYPEEVDDDLICHICLQALLDPLDTPC--GHTYCTLCLTNFLVEKDFCPMDR 79
            ||.|      :|...||..|.|..|. .|.:|.:.::.|.  |..|.::            |:..
  Fly   386 LEANLRRHSRNFTLSPETTDYDSNCG-DLDSLSNDINCPTDFGKLYTSM------------PVLE 437

Human    80 KPLVLQHCKKSSILVNKLLNKLLVTC---------PFREHCTQVLQRCDLEHHFQTSCKGASHYG 135
            ..|...|...:.       |.:.|.|         |..||.... :|.:.:::..:    ||...
  Fly   438 DGLSSGHASDTE-------NNVSVVCDKQQSSQSQPVHEHNGNG-ERLENDYNVMS----ASLAT 490

Human   136 LTKDRKRRSQDGCPDGCASL---TATAPS--PEVSAAATISLMTDEPGLDNP-------AYVS-- 186
            ||.|   .||.......|||   .|..||  |::..|.....||..|..|||       .|.:  
  Fly   491 LTTD---ASQSALISDFASLPMPPAPPPSSPPQIEIADASESMTMVPDADNPLDSHYGAVYAAAL 552

Human   187 -------SAEDGQPAISPVDSGRSNRTRARPFERSTIRSRSFKKINRAL----SVLRRTKSGSAV 240
                   ||..|. .::||.:|.|            :.|::..:|..|:    |.|:|.|:....
  Fly   553 GGTHTEKSAGSGL-GVTPVTAGGS------------LPSQAASEIQEAMKEIRSALQRAKTQPEK 604

Human   241 ANHADQGRENSENTTAPEVFPRLYHLIPDGEI------TSIKINR-----VDPSESLSI-RLVGG 293
            ....|            ||.|    ..||..:      |:|...:     .:|...|.. ||:|.
  Fly   605 LKFCD------------EVLP----TDPDSPVWVPRKGTTISTAQGAAADEEPDTDLETDRLLGQ 653

Human   294 SETPLVHIIIQHIYRDGVIARDGRLLPGDIILK---VNGMDISN--------VPHNYAVRLLRQP 347
            ....     .|..:.|..:| |.....|..|..   :||...:|        .|..|:...:||.
  Fly   654 QRHD-----EQDFFADQSLA-DNNANEGTDIASNGHLNGTSDNNNPNPMNNSKPQTYSTATIRQG 712

Human   348 ------------CQVLWLTVM-----REQKFRSRNNGQAPDAYRPRDDSFHVILNKSSPEEQLGI 395
                        ||::..|.:     .:.:|.....|..                ||..:.....
  Fly   713 IGTSLTPNSPDICQIVGTTDISISSPEKLQFTKSPTGSI----------------KSLKDSANSD 761

Human   396 KLVRKVDEPGVFIFNVLDGGVAYRHGQLEENDRVLAINGHDLRYGSPESAAHLIQASE------- 453
            |..:..::.|:....||..||.:|...|.....|..        |.|..:..::||.|       
  Fly   762 KKAKSRNKEGLLEPKVLIEGVLFRARYLGSTQLVCE--------GQPTKSTRMMQAEEAVSRIKA 818

Human   454 ----------RRVHLVVSRQ----------------------------------VRQR------- 467
                      ..|.|.:|.:                                  .|:|       
  Fly   819 LAPEGESQPSTEVDLFISTEKIMVLNTDLKEIMMDHALRTISYIADIGDLVVLMARRRFVPNSVV 883

Human   468 SPDIFQEAGWNSNGSWSPGPGERSNTPK-PLH-----PTITCH---------------------- 504
            .|.|....|    ...:||.||..:.|| ||.     |.:.||                      
  Fly   884 DPSITSPLG----DVPTPGIGEEESPPKEPLSKHNRTPKMICHVFESDEAQFIAQSIGQAFQVAY 944

Human   505 ------------------------------------------EKVVNIQKDPGESLGMTVAGGAS 527
                                                      :|.|.:.|..||.||:.:.... 
  Fly   945 MEFLKANGIENESLAKEMDYQEVLNSQEIFGDELEIFAKKELQKEVVVPKAKGEILGVVIVESG- 1008

Human   528 HREWD--LPIYVI-SVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRTSSSIVLK- 588
               |.  ||..|| ::...|..:|.|::..||.|:.::|:.|..:..|...:.::...:...:| 
  Fly  1009 ---WGSMLPTVVIANLMSSGAAARCGQLNIGDQLIAINGMSLVGLPLSTCQSYIRNAKNQTAVKF 1070

Human   589 -------ALEVKEYEPQEDCSSPAALDSNHNMAPPSDWSPSWVMWLELPRCLYNCKDIVLRRNTA 646
                   .:|||                                              :||....
  Fly  1071 TVVPCPPVVEVK----------------------------------------------ILRPKAL 1089

Human   647 GSLGFCIVGGYEEYNGNKPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRSTSGMIHACLARLLKE 711
            ..|||.:..|          .|.|::.|..|...| :|.|..::.:|.:|...:.|..:.:||..
  Fly  1090 FQLGFSVQNG----------VICSLLRGGIAERGG-VRVGHRIIEINNQSVVAVPHDTIVKLLSS 1143

Human   712 LKGRITL 718
            ..|.|.:
  Fly  1144 SVGEILM 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LNX1NP_001119800.1 mRING-HC-C3HC3D_LNX1 38..79 CDD:319693 8/42 (19%)
modified RING-HC finger (C3HC3D-type) 41..78 CDD:319693 7/38 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..214 11/51 (22%)
NPXY motif 181..184 2/9 (22%)
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 186..244 14/70 (20%)
PDZ_signaling 272..355 CDD:238492 22/117 (19%)
PDZ_signaling 380..460 CDD:238492 18/96 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 475..494 5/18 (28%)
PDZ_signaling 505..588 CDD:238492 21/85 (25%)
PDZ_signaling 637..721 CDD:238492 20/82 (24%)
X11LNP_001285376.1 PTB_X11 775..954 CDD:269919 31/190 (16%)
PDZ_signaling 988..1065 CDD:238492 21/80 (26%)
PDZ_signaling 1092..1151 CDD:238492 18/70 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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