Sequence 1: | NP_001119800.1 | Gene: | LNX1 / 84708 | HGNCID: | 6657 | Length: | 728 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_610683.1 | Gene: | sprt / 246397 | FlyBaseID: | FBgn0082585 | Length: | 634 | Species: | Drosophila melanogaster |
Alignment Length: | 444 | Identity: | 85/444 - (19%) |
---|---|---|---|
Similarity: | 149/444 - (33%) | Gaps: | 138/444 - (31%) |
- Green bases have known domain annotations that are detailed below.
Human 131 ASHYGLTKDRKRRSQDGCPDGCA-----SLTATAPSPEVSAAATISLMTDEPGLDNPAYVSSAED 190
Human 191 GQPAISPVDSGRSNRTRARPFERSTIRSRSF----KKINRALSVLRRTKSGSAVANHADQGRENS 251
Human 252 ENTTAPEVFPRLYHLIPDGEITSIKI-------NRVDPSESLSIRLVGGSETPLVHIIIQHIYRD 309
Human 310 GVIARDGRLLPGDIILKVNGMDISNVPHNYAVRLLRQPCQVLWLTVMREQKFRSRNNGQAPDAYR 374
Human 375 PRDDSFHVILNKSSPEEQL-------GIKL--------------VRKVDEPGVFIFNVLDGGVAY 418
Human 419 RHGQLEENDRVLAINGHDLRYGSPESAAHLIQASERRVHLVVSRQ----VRQRSPDIFQEAGWNS 479
Human 480 NG--SWSPGPGERSNTPKPLHPT---ITCHEKVVNIQKDPGESLGMTVAGGASH 528 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
LNX1 | NP_001119800.1 | mRING-HC-C3HC3D_LNX1 | 38..79 | CDD:319693 | |
modified RING-HC finger (C3HC3D-type) | 41..78 | CDD:319693 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 178..214 | 4/35 (11%) | |||
NPXY motif | 181..184 | 0/2 (0%) | |||
Interaction with MAGEB18. /evidence=ECO:0000269|PubMed:20864041 | 186..244 | 12/61 (20%) | |||
PDZ_signaling | 272..355 | CDD:238492 | 14/89 (16%) | ||
PDZ_signaling | 380..460 | CDD:238492 | 22/100 (22%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 475..494 | 1/20 (5%) | |||
PDZ_signaling | 505..588 | CDD:238492 | 5/24 (21%) | ||
PDZ_signaling | 637..721 | CDD:238492 | |||
sprt | NP_610683.1 | PDZ | <247..288 | CDD:294084 | 11/47 (23%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |