DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO18B and MYO1

DIOPT Version :9

Sequence 1:XP_011528760.1 Gene:MYO18B / 84700 HGNCID:18150 Length:2610 Species:Homo sapiens
Sequence 2:NP_011888.1 Gene:MYO1 / 856418 SGDID:S000001065 Length:1928 Species:Saccharomyces cerevisiae


Alignment Length:1959 Identity:446/1959 - (22%)
Similarity:819/1959 - (41%) Gaps:459/1959 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   538 GGQSRDSDQAPEDRWYEAEKVWLA-QKDGFTLATVLKPDEGTADLPAGRVRLWIDADKTITEVDE 601
            ||||..|:..          ||:. :|:.|....::..|...........::.|......|||..
Yeast     3 GGQSCSSNMI----------VWIPDEKEVFVKGELMSTDINKNKFTGQEEQIGIVHPLDSTEVSN 57

Human   602 ------EHVHRANPPELDQVEDLASLISVNESSVLNTLLQRYKAQLLHTCTGPDLIVLQP----- 655
                  ..|...||...|:||:::.|..:||.|||..|.:||...|::|.:|..|:.:.|     
Yeast    58 LVQVRISDVFPVNPSTFDKVENMSELTHLNEPSVLYNLEKRYDCDLIYTYSGLFLVAINPYHNLN 122

Human   656 -----------RGPSVPSAGKVPKGRRDGLPAHIGSMAQRAYWALLNQRRDQSIVALGWSGAGKT 709
                       ...:..|..::.:...:.||.||.::|:.||..||::.:||||:..|.||||||
Yeast   123 LYSEDHINLYHNKHNRLSKSRLDENSHEKLPPHIFAIAEEAYENLLSEGKDQSILVTGESGAGKT 187

Human   710 TCCEQVLEHLVGM-AGS------VDGRVSVE----KIRATFTVLRAFGSVSMAHSRSATRFSMVM 763
            ...:::|::|..: :||      |.|...||    ||..:..:|.:||:.....:.:::||...:
Yeast   188 ENTKKILQYLASITSGSPSNIAPVSGSSIVESFEMKILQSNPILESFGNAQTVRNNNSSRFGKFI 252

Human   764 SLDFNATGRITAAQLQTMLLEKSRVARQPEGESNFLVFSQMLAGLD------LDLRTELNLHQMA 822
            .::||..|.|..|.::..||||||:..|...|.|:.:|.|:|:|||      |.|::. |:....
Yeast   253 KIEFNEHGMINGAHIEWYLLEKSRIVHQNSKERNYHIFYQLLSGLDDSELKNLRLKSR-NVKDYK 316

Human   823 DSSSFGMGVWSKPEDKQKAAAAFAQLQGAMEMLGISESEQRAVWRVLAAIYHLGAAGACKVGRKQ 887
            ..|:....:.....|.:.    |.:|..|:.::|.|:.:.|.:::|:|.|        ..:|..:
Yeast   317 ILSNSNQDIIPGINDVEN----FKELLSALNIIGFSKDQIRWIFQVVAII--------LLIGNIE 369

Human   888 FM--RFEWANYAAEA------LGCEYEELNTATFKHHLRQIIQQMTFGPSRWGLEDEETSSGLKM 944
            |:  |.|.|::..:.      ||.:.::..||        |::..:.....| :...:.|...|.
Yeast   370 FVSDRAEQASFKNDVSAICSNLGVDEKDFQTA--------ILRPRSKAGKEW-VSQSKNSQQAKF 425

Human   945 TGVDCVEGMASGLYQELFAAVVSLINRSFSSHHLSMASIMVVDSPGFQNPRHQGKDRAATFEELC 1009
                .:..::..||:.||..:|.:||::......::..|.::|..||:...:.      :||:||
Yeast   426 ----ILNALSRNLYERLFGYIVDMINKNLDHGSATLNYIGLLDIAGFEIFENN------SFEQLC 480

Human  1010 HNYAHERLQLLFYQRTFVSTLQRYQEEGVPVQFDLPDPSPGTTVAVVDQNPSQQVRLPAGGGAQD 1074
            .||.:|:||..|....||.....|.:|.  :|:|           .:|.....|:.:........
Yeast   481 INYTNEKLQQFFNNHMFVLEQSEYLKEN--IQWD-----------YIDYGKDLQLTIDLIESKGP 532

Human  1075 ARGLFWVLDEEVHVEGSSDSVVLERLCAAFEKKGAGTEGSSALRTCEQPLQCEIFHQLGWDPVRY 1139
            ..|:..:||||..:..|:|.....:|.:.::      :.||..:.........:.|..|  .|.|
Yeast   533 PTGVLPLLDEEAVLPKSTDESFYSKLISTWD------QNSSKFKRSRLKNGFILKHYAG--DVEY 589

Human  1140 DLTGWLHRAK----PNLSALDAPQVLHQSKREELRSLFQARAKLPPVCRAVAGLEGT-SQQALQR 1199
            .:.|||.:.|    .||.:|     |..|:.:.:..|||...:.    .:.||:|.. |.|.:::
Yeast   590 TVEGWLSKNKDPLNDNLLSL-----LSSSQNDIISKLFQPEGEK----SSSAGVEANISNQEVKK 645

Human  1200 SRMVRRTFASSLAAVRRKAPCSQIKLQMDALTSMIKRSRLHFIHCLVPNPVVESRSGQESPPPPQ 1264
            |... .||         |...|:.:.|...|.:.:..:..||:.|::||.|.:.::....     
Yeast   646 SART-STF---------KTTSSRHREQQITLLNQLASTHPHFVRCIIPNNVKKVKTFNRR----- 695

Human  1265 PGRDKPGAGGPLALDIPALRVQLAGFHILEALRLHRTGYADHMGLTRFRRQFQVL------DAPL 1323
                       |.||      ||....:||.:||.|.||.:.:....|.:::::|      ....
Yeast   696 -----------LILD------QLRCNGVLEGIRLAREGYPNRIAFQEFFQRYRILYPENSTTTTF 743

Human  1324 LKKLMSTSEGIDERKAVEELLETLDLEKKAVAVGHSQVFLKAGVISRLEKQREKLVSQSIVLFQA 1388
            ..||.:::     ::..|.||.:|.|:.|...:|::::|.||||::.||||::..::..::...|
Yeast   744 SSKLKAST-----KQNCEFLLTSLQLDTKVYKIGNTKLFFKAGVLADLEKQKDVKLNNIMIKLTA 803

Human  1389 ACKGFLSRQE----FKKLKIRRLAAQCIQKNVAVFLAVKDWPWWQLLGSLQPLLSATIGTEQLRA 1449
            ..:|:..|:|    .:|||..|:.....:....:   ||:.||:.|...::|||:::....:.:.
Yeast   804 TIRGYTVRKEITYHLQKLKKTRVIGNTFRLYNRL---VKEDPWFNLFIRIKPLLTSSNDMTRTKK 865

Human  1450 KEEELTTLRRKL-----------EKSEKLRNELRQNTDLLESKIADLTSDLADERFKGDVACQVL 1503
            ..|::..|:..|           ||::|..|||....|||..:..:|       |....:..:|.
Yeast   866 FNEQINKLKNDLQEMESKKKFLEEKNQKTVNELENTQDLLNQEKENL-------RKNESLLNRVK 923

Human  1504 ESERAERLQAFREVQELKSKHEQVQKKLGDVNKQLEEAQQKIQLNDLERNPTGGADEWQMRFDCA 1568
            .|  :|.||  ::..:|.|:.:::.::..:|.:.||||.||||                      
Yeast   924 TS--SETLQ--KQFDDLVSEKDEISREKLEVAQNLEEAHQKIQ---------------------- 962

Human  1569 QMENEFLRKRLQQCEERLDSELTARKELEQKLGEL----------QSAYDGAK-KMAHQLKRKCH 1622
                 .|::.:::.|..|:...:...||.:::.:|          ||....:| |:.:::||   
Yeast   963 -----GLQETIREREATLEKLHSKNNELIKQISDLNCDISKEQSSQSLIKESKLKLENEIKR--- 1019

Human  1623 HLTCDLEDTCVLLENQ-QSRNHELEKKQKKFDLQLAQALGESVFEKG-------LREKVTQ---- 1675
                 |:|.....|.: :|.|.:|...::..|::|.      ..||.       |:..||:    
Yeast  1020 -----LKDVINSKEEEIKSFNDKLSSSEEDLDIKLV------TLEKNCNIAMSRLQSLVTENSDL 1073

Human  1676 --ENTSVRWELGQLQQQLKQKEQEASQLKQQVEMLQDHKRELLGSPSLGENCV-------AGLKE 1731
              :|.:.:.|...|..|||.||.|..::|::::   :||:||.......::.|       |.|||
Yeast  1074 RSKNENFKKEKAALNNQLKNKESELLKMKEKID---NHKKELATFSKQRDDAVSEHGKITAELKE 1135

Human  1732 RLWKLESSALEQQKIQSQQENTIKQLEQLRQRFELEIERMKQMHQKDREDQEEELEDVRQSCQKR 1796
            ...:|.......|||:.:..|           |:.|   .|:..||.|....|.|.|      .:
Yeast  1136 TRIQLTEYKSNYQKIKEEYSN-----------FQRE---TKEQEQKKRNSLVESLND------SK 1180

Human  1797 LHQLEMQLEQEYEEKQMV----------------------LHEKQDLEGLIGTLCD-QIGHRDFD 1838
            :.:||.:|.||....|.:                      ..:..|.|.:|....| |:...  :
Yeast  1181 IKELEARLSQEISLNQYLNKRISGNSVETNISSTRRSTSYSDDPLDKEDIIKKYYDLQLAFT--E 1243

Human  1839 VEKRLRRDLRRTHALLS-----DVQLLLGTMEDGKTSVSKEELEKVHSQLEQS---EAKCEEALK 1895
            :.:.|..::.....|:|     :.:|...:.||.|.....::|:|:...::.|   ::...|.|.
Yeast  1244 ITRNLENEIEEKKNLISRLRFTETRLASSSFEDQKIKAQMKKLKKLIQDMDPSIPLDSILNEPLD 1308

Human  1896 ---------TQKVLTAD-------------------LESMHSELENMTRNKSLVDEQLYRLQFEK 1932
                     .:.:|..|                   :.::||:...:....||....:|:|:||.
Yeast  1309 NCPDKESDINKLMLEVDYLKRQLDIETRAHYDAENAISALHSKFRKIQGESSLSSSDIYKLKFEA 1373

Human  1933 ADLLKRIDEDQDDLNELMQKHK------DLIAQSAADIGQIQELQLQLEEAKKEKHKLQEQL--- 1988
            ::  :|:...:|.|..:..:.:      |:| ::...|.:.:|   ::...|.|.:||||.|   
Yeast  1374 SE--ERVKSLEDKLKTMPLRDRTNLPVGDII-KNRDSISKYEE---EIRYYKLENYKLQEILNES 1432

Human  1989 --QVAQMRIEYLEQSTVDRAIVSRQ-EAVICDLENKTEFQ--------KVQIKRFEVLV------ 2036
              :::|:.:: |.||....|::|.| :.:..|||: ||.|        |.|.::||..:      
Yeast  1433 NGKLSQLTLD-LRQSKSKEALLSEQLDRLQKDLES-TERQKELLSSTIKQQKQQFENCMDDLQGN 1495

Human  2037 -IRLRDSL--IKMGEE-------LSQAATSESQQRE------------SSQYYQRRLEELK--AD 2077
             :|||:.:  :|..||       :.:...::::|:|            |....|..|.|||  .|
Yeast  1496 ELRLREHIHALKQAEEDVKNMASIIEKLKTQNKQKEKLIWEREMERNDSDMQLQETLLELKRVQD 1560

Human  2078 MEELVQRE-AEASRRCMELE---KYVEELAAVRQTLQTDL--ETSIRR-IADLQAALEEVASSDS 2135
            :::::..: |....|...:|   :|.:|:..:::.|...|  ||:::: .|.|:..| |.:::||
Yeast  1561 VKKILSDDLAHLKERLSAVEDRSQYTDEINRLKEELNCSLKAETNLKKEFATLKYKL-ETSTNDS 1624

Human  2136 DTESVQTAVDCGSSGRKEMDN----VSILSSQPEGSLQSWLSCTLSLATDTMRTPSRQSATSSRI 2196
            :.:.        |...|::|:    |.:|:::.:         .:|||...:........|....
Yeast  1625 EAKI--------SDLLKQLDHYTKVVEMLNNEKD---------AISLAEKELYQKYEALNTECES 1672

Human  2197 LSPRI-------NEEAGDTERTQSALALSRARSTNVHSKTSGDKPVSPHFVRRQKYCHFGDGEVL 2254
            |..:|       .|...|..:...||.:|.|.   :.|.|..:|.::    .:.||..    |.|
Yeast  1673 LKGKIVSLTKIKQELESDLNQKTDALQISNAA---LSSSTQKNKEIT----EKIKYLE----ETL 1726

Human  2255 AVQRKSTER 2263
            .:|.:...|
Yeast  1727 QLQMEQNSR 1735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO18BXP_011528760.1 Glutenin_hmw <114..542 CDD:281191 3/3 (100%)
MYSc 608..1376 CDD:214580 207/819 (25%)
MYSc_Myo18 627..1364 CDD:276837 191/788 (24%)
Smc 1457..>2133 CDD:224117 179/834 (21%)
GBP_C <1723..1818 CDD:303769 25/123 (20%)
coiled coil 1789..1803 CDD:293879 2/13 (15%)
RILP-like 1923..>2020 CDD:304877 27/108 (25%)
MYO1NP_011888.1 COG5022 2..1691 CDD:227355 432/1902 (23%)
Smc 1534..>1890 CDD:224117 48/231 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 115 1.000 Domainoid score I1477
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45615
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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