DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MYO18B and myo-3

DIOPT Version :9

Sequence 1:XP_011528760.1 Gene:MYO18B / 84700 HGNCID:18150 Length:2610 Species:Homo sapiens
Sequence 2:NP_506065.2 Gene:myo-3 / 179676 WormBaseID:WBGene00003515 Length:1969 Species:Caenorhabditis elegans


Alignment Length:2011 Identity:459/2011 - (22%)
Similarity:843/2011 - (41%) Gaps:487/2011 - (24%)


- Green bases have known domain annotations that are detailed below.


Human   539 GQSRDSDQAPEDRWYEAEK-VWLAQ-KDGFTLATVLKPDEGTADLPAGRVRLWIDADKTITEVDE 601
            |.||::..|...|.::::| .|:.. :|||..|.:    :.|.   ..:|.:.......|| |.:
 Worm    18 GISREARAATAARPFDSKKNCWIPDPEDGFVAAEI----QSTT---GEQVTVVTVKGNQIT-VKK 74

Human   602 EHVHRANPPELDQVEDLASLISVNESSVLNTLLQRYKAQLLHTCTGPDLIVLQP--RGPSVPSA- 663
            :.....|||:.|:.||:|:|..:||:|||..|..|||..:::|.:|...:|:.|  |.|....: 
 Worm    75 DQCQEMNPPKFDKTEDMANLTFLNEASVLGNLKDRYKDLMIYTYSGLFCVVINPYKRLPIYSESV 139

Human   664 -----GKVPKGRRDGLPAHIGSMAQRAYWALLNQRRDQSIVALGWSGAGKTTCCEQVLEH--LVG 721
                 ||    ||:.:|.|:.:::..||..::..:.:||::..|.||||||...::|:.:  :||
 Worm   140 IKHFMGK----RRNEMPPHLFAVSDEAYRNMVQDKENQSMLITGESGAGKTENTKKVISYFAIVG 200

Human   722 MAGSVDGRVS---------VEKIRATFTVLRAFGSVSMAHSRSATRFSMVMSLDFNATGRITAAQ 777
            ...:..|:.:         .|:|..|..||.|||:.....:.:::||...:...|:.:|::....
 Worm   201 ATQAASGKEAKDGKKGGTLEEQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRTHFSGSGKLAGGD 265

Human   778 LQTMLLEKSRVARQPEGESNFLVFSQMLAGLDLDLRTELNLH---------QMADSSSFGMGVWS 833
            ::..|||||||.||..||..:.:|.|:::|.|..||.:|.|.         ..|:.:..||    
 Worm   266 IEHYLLEKSRVVRQAPGERCYHIFYQIMSGNDPSLRGKLKLSNDITYYHFCSQAELTIEGM---- 326

Human   834 KPEDKQKAAAAFAQLQGAMEMLGISESEQRAVWRVLAAIYHLGAAGACKVGRKQFMRFEWAN--- 895
              :||::....    |.|.:::|..::|...::|..|.|.|:|     ::..||..|.|.|.   
 Worm   327 --DDKEEMRLT----QEAFDIMGFEDNETMDLYRSTAGIMHMG-----EMKFKQRPREEQAEPDG 380

Human   896 -----YAAEALGCEYEELNTATFKHHLRQIIQQMTFGPSRWGLEDEETSSGLKMTGVD-CVEGMA 954
                 .||..||.:.||...|..|..:|              :..|..:.|..:..|: .|.|:|
 Worm   381 EEDALNAAAMLGIQAEEFLKALTKPRVR--------------VGTEWVNKGQNLEQVNWAVSGLA 431

Human   955 SGLYQELFAAVVSLINRSFSSHHLSMAS-IMVVDSPGFQ----NPRHQGKDRAATFEELCHNYAH 1014
            ..:|..:|..:::..|::..:..:.... |.|:|..||:    |          :||:|..|:.:
 Worm   432 KAIYARMFKWIITRCNKTLDAKEIERKHFIGVLDIAGFEIFDLN----------SFEQLWINFVN 486

Human  1015 ERLQLLFYQRTFVSTLQRYQEEGVPVQF-----DLPDPSPGTTVAVVDQNPSQQVRLPAGGGAQD 1074
            ||||..|....||...:.|:.||:...|     ||             |...:.:..|.      
 Worm   487 ERLQQFFNHHMFVLEQEEYKREGIAWTFIDFGLDL-------------QACIELIEKPL------ 532

Human  1075 ARGLFWVLDEEVHVEGSSDSVVLERLC-------AAFE--KKGAGTEGSSALRTCEQPLQCEIFH 1130
              |:..:||||..|..::|....::|.       ..|:  |...|.:|.:         ...|.|
 Worm   533 --GIISILDEECIVPKATDMTYAQKLLDQHLGKHPNFQKPKPPKGKQGDA---------HFAIVH 586

Human  1131 QLGWDPVRYDLTGWLHRAKPNLSALDAPQVLHQSKREELRSLFQARAKLPPVCRAVAGLEGTSQQ 1195
            ..|  .|||:.|.:|.:.|..|:......:.|.:....:..::|...              |.::
 Worm   587 YAG--TVRYNATNFLEKNKDPLNDTAVALLKHSTDNSLMLDIWQDYQ--------------TQEE 635

Human  1196 ALQRSRM-----VRRTFASSLAAVRRKAPCSQI-KLQMDALTSMIKRSRLHFIHCLVPNPVVESR 1254
            |.:.::.     .:|..:||.|.|      |.| :..::.|.:|:.::..|||.|::||      
 Worm   636 AAEAAKAGQTAGGKRGKSSSFATV------SMIYRESLNNLMNMLYQTHPHFIRCIIPN------ 688

Human  1255 SGQESPPPPQPGRDKPGAGGPLALDIPALRVQLAGFHILEALRLHRTGYADHMGLTRFRRQFQVL 1319
                         :|..:|   .:|...:..||....:||.:|:.|.|:.:.|....|:.::.:|
 Worm   689 -------------EKKASG---VIDSALVLNQLTCNGVLEGIRICRKGFPNRMLYPDFKHRYAIL 737

Human  1320 DAPLLKKLMSTSEGIDERKAVEELLETL----DLEKKAVAVGHSQVFLKAGVISRLEKQREKLVS 1380
            .|...|:       .|.:||...:|:.:    :|..:...||.:::|.||||:::||..|::::|
 Worm   738 AADAAKE-------SDPKKASVGILDKISVDGNLTDEEFKVGETKIFFKAGVLAKLEDLRDEILS 795

Human  1381 QSIVLFQAACKGFLSRQEFKKLKIRRLAAQCIQKNVAVFLAVKDWPWWQLLGSLQPLLSATIGTE 1445
            :.:.:||:..:.:|::.|.::...::.....:|:||..:..::.|.|::|.|.::|:|.|  |.|
 Worm   796 RIVTMFQSRIRSYLAKAEVRRRYEQQTGLLVVQRNVRAWCTLRTWEWFKLFGKVKPMLKA--GKE 858

Human  1446 QLRAKEEELTTLRRKLEKSEKL--RNELRQNTDLLESKIADLTSDLADERFKGDVACQVLESERA 1508
            |     |.:..|..|::|.|:.  |.|:.::.  |||::|||..:       .:.....||:|:|
 Worm   859 Q-----EAMGELAVKIQKLEEAVQRGEIARSQ--LESQVADLVEE-------KNALFLSLETEKA 909

Human  1509 ERLQAFREVQELKSKHEQVQKKLGDVNKQLEEAQQ-------------------KIQLNDLERNP 1554
            ....|....::|......::.||.|:..|||:.|:                   |..:.|||.:.
 Worm   910 NLADAEERNEKLNQLKATLESKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQDLELSL 974

Human  1555 TGGADEWQMR-FDCAQMENEFLRKRLQQCEERLDSELTARKELEQKLGE-LQSAYDGAKKMAH-- 1615
            .....|.|.| .:...:::|...:  .:...:|:.|...::|..:||.| |||..|   |:.|  
 Worm   975 RKAEQEKQSRDHNIRSLQDEMANQ--DEAVAKLNKEKKHQEESNRKLNEDLQSEED---KVNHLE 1034

Human  1616 QLKRKCHHLTCDLEDTCVLLENQQSRNHELEKKQKKF--DLQLAQALGESV------FEKGLREK 1672
            :::.|......:||:.   ::.::....::||.::|.  ||::||...:.:      .|..|:.|
 Worm  1035 KIRNKLEQQMDELEEN---IDREKRSRGDIEKAKRKVEGDLKVAQENIDEITKQKHDVETTLKRK 1096

Human  1673 VTQ---------ENTSVRWELGQLQQQLKQKEQEASQLKQQVEMLQDHKRELLGSPSLGENCVAG 1728
            ...         ||.|:   :.:||:.:|:.....::|::::|..::.:::...|.|..|..:..
 Worm  1097 EEDLHHTNAKLAENNSI---IAKLQRLIKELTARNAELEEELEAERNSRQKSDRSRSEAERELEE 1158

Human  1729 LKERLWKLESSALEQQKIQSQQENTIKQLEQLRQRFELEIERMKQMHQKDREDQEEEL--EDVRQ 1791
            |.|||             :.|...|..|||..::| |.||.:::      ||.:|:.|  |....
 Worm  1159 LTERL-------------EQQGGATAAQLEANKKR-EAEIAKLR------REKEEDSLNHETAIS 1203

Human  1792 SCQKRLHQLEMQLEQEYEEKQMVLHEKQDLEGLIGTLCDQIGHRDFDVEKRLRRDLRRT-HALLS 1855
            |.:||......:|.::.|..|. |..|.:.|                 :.:|:|||..: ||..|
 Worm  1204 SLRKRHGDSVAELTEQLETLQK-LKAKSEAE-----------------KSKLQRDLEESQHATDS 1250

Human  1856 DVQLLLGTMEDGKTSVSKEELEK----VHSQLEQSEAKCEE---------ALKTQ-----KVLTA 1902
            :|:             |:::|||    :..|..:.:.|.:|         |||.:     ..|..
 Worm  1251 EVR-------------SRQDLEKALKTIEVQYSELQTKADEQSRQLQDFAALKNRLNNENSDLNR 1302

Human  1903 DLESMHSELENMTRNKSLVDEQL------YRLQFEKADLLKRIDEDQDDLNELMQKHKDLIAQSA 1961
            .||.|.::|.::.|.||.:..||      |..:..:...|....::.:..|.::::|.|..|:|.
 Worm  1303 SLEEMDNQLNSLHRLKSTLQSQLDETRRNYDEESRERQALAATAKNLEHENTILREHLDEEAESK 1367

Human  1962 ADI-GQIQELQLQLEEAK-----KEKHKLQE--------QLQVAQM-----------------RI 1995
            ||: .||.:|..::::.|     :..:||:|        ||:|.::                 |.
 Worm  1368 ADLTRQISKLNAEIQQWKARFDSEGLNKLEEIEAAKKALQLKVQELTDTNEGLFAKIASQEKVRF 1432

Human  1996 EYLE-----QSTVDRAIVS--------RQ-EAVICDLENKTEFQKVQIKRFEVLVIRLRDSLIKM 2046
            :.::     ||.|::|...        || |::|.:.:.||:....::...:      ||:. ::
 Worm  1433 KLMQDLDDAQSDVEKAAAQVAFYEKHRRQFESIIAEWKKKTDDLSSELDAAQ------RDNR-QL 1490

Human  2047 GEELSQAATSESQQRESSQYYQRRLEELKADMEELVQREAEASRRCMELEKYVEELAAVRQTLQ- 2110
            ..:|.:|.|:..:..|.....:|..:.|..::::|..:..|..|...||:|.|.:|...::.|| 
 Worm  1491 STDLFKAKTANDELAEYLDSTRRENKSLAQEVKDLTDQLGEGGRSVAELQKIVRKLEVEKEELQK 1555

Human  2111 ---------------------------TDLETSI---------------RRIADLQAALEEVASS 2133
                                       :::|..|               |.:..:||.||.....
 Worm  1556 ALDEAEAALEAEEAKVLRAQIEVSQIRSEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQ 1620

Human  2134 -----------DSDTESVQTAVDCGSSG--------RKEMDNVSILSSQPEGSLQSWLSCTLSLA 2179
                       :||...::.|:|..:..        :|.|:.|..|..|.|...:.         
 Worm  1621 KEEALRIKKKLESDINDLEIALDHANRAYADAQKTIKKYMETVQELQFQIEEEQRQ--------- 1676

Human  2180 TDTMRTPSRQSATSSRILSPRINEEAGDTERTQSALALSRARSTNVHSKTSG-DKPVSPHFVRRQ 2243
            .|.:|.....|...:.||....:|.|...|..:.|...:.|....:..:.:. :..||....:|:
 Worm  1677 KDEIREQFLASEKRNAILQSEKDELAQQAEAAERARRNAEAECIELREQNNDLNAHVSALTGQRR 1741

Human  2244 KYCHFGDGEVLAVQRKSTERLEPASSPLASRSTNTSPLSREKLPSPSAALSEFVEGLRRKR 2304
            |.    :||:||...:..|        :|:...|    :.|:....||..:...|.||:::
 Worm  1742 KL----EGELLAAHAELEE--------IANELKN----AVEQGQKASADAARLAEELRQEQ 1786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO18BXP_011528760.1 Glutenin_hmw <114..542 CDD:281191 1/2 (50%)
MYSc 608..1376 CDD:214580 207/833 (25%)
MYSc_Myo18 627..1364 CDD:276837 191/802 (24%)
Smc 1457..>2133 CDD:224117 179/832 (22%)
GBP_C <1723..1818 CDD:303769 26/96 (27%)
coiled coil 1789..1803 CDD:293879 3/13 (23%)
RILP-like 1923..>2020 CDD:304877 30/147 (20%)
myo-3NP_506065.2 Myosin_N 36..73 CDD:280832 10/44 (23%)
Myosin_head 88..779 CDD:278492 197/814 (24%)
MYSc_class_II 100..779 CDD:276951 191/802 (24%)
Myosin_tail_1 857..1937 CDD:279860 219/1038 (21%)
DUF4795 932..1090 CDD:292662 36/165 (22%)
SPEC 1186..1391 CDD:295325 55/241 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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