DRSC/TRiP Functional Genomics Resources

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Protein Alignment MYO18B and myo-1

DIOPT Version :10

Sequence 1:XP_011528760.1 Gene:MYO18B / 84700 HGNCID:18150 Length:2610 Species:Homo sapiens
Sequence 2:NP_492053.1 Gene:myo-1 / 172471 WormBaseID:WBGene00002348 Length:1938 Species:Caenorhabditis elegans


Alignment Length:2004 Identity:454/2004 - (22%)
Similarity:806/2004 - (40%) Gaps:462/2004 - (23%)


- Green bases have known domain annotations that are detailed below.


Human   534 EEGKGGQ----SRDSDQAPEDRWYEAEK-VWLAQKDGFTLATVLK---PDEGTADLPAGRVRLWI 590
            |:..|.|    ||:...|.:.|.|:::| ||:...:...:..|:|   |...|..:.||      
 Worm     6 EKDPGWQYLKRSREQQLADQSRPYDSKKNVWIPDAEEGYIEGVIKGPGPKADTVIVTAG------ 64

Human   591 DADKTITEVDEEHVHRANPPELDQVEDLASLISVNESSVLNTLLQRYKAQLLHTCTGPDLIVLQP 655
              .|.:| :.::.|...|||:.::.||:::|..:|::|||..|..||.|.|::|.:|...:|:.|
 Worm    65 --GKDVT-LKKDIVQEVNPPKFEKTEDMSNLTFLNDASVLWNLRSRYAAMLIYTYSGLFCVVINP 126

Human   656 --RGP-SVPSAGKVPKG-RRDGLPAHIGSMAQRAYWALLNQRRDQSIVALGWSGAGKTTCCEQVL 716
              |.| ...|..::..| ||..:|.|:.:::.:||..:|....:||::..|.||||||...::|:
 Worm   127 YKRLPIYTDSVARMFMGKRRTEMPPHLFAVSDQAYRYMLQDHENQSMLITGESGAGKTENTKKVI 191

Human   717 EHLVGMAGS-----VDGRVSV---EKIRATFTVLRAFGSVSMAHSRSATRFSMVMSLDFNATGRI 773
            .:...:..|     .:|...|   ::|..|..||.|||:.....:.:::||...:.:.||..|.:
 Worm   192 CYFATVGASQKAALKEGEKEVTLEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGTL 256

Human   774 TAAQLQTMLLEKSRVARQPEGESNFLVFSQMLAGLDLDLRTELNLHQ-------MADSSSFGMGV 831
            .:..::..|||||||.||..||..:.:|.|:.:.....||.||.|:.       :|.:.....|:
 Worm   257 ASCDIEHYLLEKSRVIRQAPGERCYHIFYQIYSDFKPQLRDELLLNHPISNYWFVAQAELLIDGI 321

Human   832 WSKPEDKQKAAAAFAQLQGAMEMLGISESEQRAVWRVLAAIYHLGAAGACKVGRKQFMRFEW--- 893
                :|.::    |.....|.::|..|.:|:...:|:::|..|:|     .:..||..|.|.   
 Worm   322 ----DDTEE----FQLTDEAFDVLKFSPTEKMDCYRLMSAHMHMG-----NMKFKQRPREEQAEP 373

Human   894 -----ANYAAEALGCEYEELNTATFKHHLRQIIQQMTFGPSRWGLEDEETSSGLKMTGVD-CVEG 952
                 |..|....|.:.::.        |:.::.......:.|      .|.|..:..|. .:..
 Worm   374 DGQDEAERACNMYGIDVDQF--------LKALVSPRVKVGTEW------VSKGQNVDQVHWAIGA 424

Human   953 MASGLYQELFAAVVSLINRSFSSHHLSM-ASIMVVDSPGFQ----NPRHQGKDRAATFEELCHNY 1012
            ||.|||..:|..:|...|.:.....:.. ..|.|:|..||:    |          :||:|..|:
 Worm   425 MAKGLYARVFHWLVKKCNLTLDQKGIDRDYFIGVLDIAGFEIFDFN----------SFEQLWINF 479

Human  1013 AHERLQLLFYQRTFVSTLQRYQEEGVPVQF-----DLPDPSPGTTVAVVDQNPSQQVRLPAGGGA 1072
            .:|:||..|....||...:.|..||:...|     ||             |...:.:..|.    
 Worm   480 VNEKLQQFFNHHMFVLEQEEYAREGIQWTFIDFGLDL-------------QACIELIEKPL---- 527

Human  1073 QDARGLFWVLDEEVHVEGSSDSVVLERLC-------AAFEK----KGAGTEGSSALRTCEQPLQC 1126
                |:..:||||..|..::|..:.::|.       ..|||    ||...|...|:|        
 Worm   528 ----GIISMLDEECIVPKATDMTLAQKLTDQHLGKHPNFEKPKPPKGKQGEAHFAMR-------- 580

Human  1127 EIFHQLGWDPVRYDLTGWLHRAKPNLSALDAPQVLHQSKREELR-SLFQ---ARAKLPPVCRAVA 1187
               |..|  .|||::..||.:.|..|:. ....|:..||:.:|. .::|   .:.:.....:|..
 Worm   581 ---HYAG--TVRYNVLNWLEKNKDPLND-TVVSVMKASKKNDLLVEIWQDYTTQEEAAAAAKAGG 639

Human  1188 GLEGTSQQALQRSRMVRRTFASSLAAVRRKAPCSQIKLQMDALTSMIKRSRLHFIHCLVPNPVVE 1252
            |.:|....:.....|:.|.                   .::.|.:|:.::..|||.|::||.  :
 Worm   640 GRKGGKSGSFMTVSMMYRE-------------------SLNKLMTMLHKTHPHFIRCIIPNE--K 683

Human  1253 SRSGQESPPPPQPGRDKPGAGGPLALDIPALRVQLAGFHILEALRLHRTGYADHMGLTRFRRQFQ 1317
            .:||.                    :|...:..||....:||.:|:.|.|:.:......|.:::.
 Worm   684 KQSGM--------------------IDAALVLNQLTCNGVLEGIRICRKGFPNRTQHPDFVQRYA 728

Human  1318 VLDAPLLKKL--MSTSEGIDERKAVEELLETLDLEKKAVAVGHSQVFLKAGVISRLEKQREKLVS 1380
            :|.|...|..  |.|..|    ..::.|:....|..:...:||::||.||||::.:|..|:..::
 Worm   729 ILAAKEAKSSDDMKTCAG----AILQALINQKQLNDEQFRIGHTKVFFKAGVVAHIEDLRDDKLN 789

Human  1381 QSIVLFQAACKGFLSRQEFKKLKIRRLAAQCIQKNVAVFLAVKDWPWWQLLGSLQPLLSATIGTE 1445
            |.|..||:|.:.:.:..:....:.:..:...:|:|:..:..::.|.|:.|.|.|:|.|......|
 Worm   790 QIITGFQSAIRWYTATADAGARRKQLNSYIILQRNIRSWCVLRTWDWFLLFGKLRPQLKCGKMAE 854

Human  1446 QLRAKEEELTTLRRKLEKSEKLRN--------------------ELRQ-NTDLLESKIADLTSDL 1489
            ::....||...|..:.:|:|..|.                    ||.| .:..:|.|:..|.|..
 Worm   855 EMIKMAEEQKVLEAEAKKAESARKSQEEAYAKLSAERSKLLEALELTQGGSAAIEEKLTRLNSAR 919

Human  1490 AD-ERFKGDVACQVLESE------RAERLQAFREVQELKSKHEQVQKKLGDVNKQLEE------- 1540
            .: |:...|...::.|.|      ..:|.:|.:||:.||...|.|.   |::.|.|||       
 Worm   920 QEVEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVD---GNLAKSLEEKAAKENQ 981

Human  1541 ---AQQKIQLND------------LERNPTGGADEWQMRFDCAQMENEFLRKRLQQ----CEERL 1586
               .|.::...|            ||.|.....|:.|.. :..|.:...||.:|:|    .||.:
 Worm   982 IHSLQDEMNSQDETIGKINKEKKLLEENNRQLVDDLQAE-EAKQAQANRLRGKLEQTLDEMEEAV 1045

Human  1587 DSELTARKELEQKLGELQSAYDGAKKMAHQ-----------LKRKCHHLTCDLEDTCVLLENQQS 1640
            :.|...|.|.|:...:::....||::...:           ||:|    ..|:....|.:|::|:
 Worm  1046 EREKRIRAETEKSKRKVEGELKGAQETIDELSAIKLETDASLKKK----EADIHALGVRIEDEQA 1106

Human  1641 RNHELEKKQKKFDLQLAQALGESVFEKGLREKVTQENTSVRWELGQLQQQL----KQKE-QEASQ 1700
            ..:.|.::.|:...::.:...|...|:..|.|..:....::.||.:|.::|    ||.| |:.:.
 Worm  1107 LANRLTRQSKENAQRIIEIEDELEHERQSRSKADRARAELQRELDELNERLDEQNKQLEIQQDNN 1171

Human  1701 LKQQVEMLQDHKRELLGSPSLGENCVAGLKERLWKLESSALEQQKIQSQQENTIKQLEQLRQRFE 1765
            .|:..|::: .:|:|.......|:.:|.::.:         ...:| |...||:..|    |:.:
 Worm  1172 KKKDSEIIK-FRRDLDEKNMANEDQMAMIRRK---------NNDQI-SALTNTLDAL----QKSK 1221

Human  1766 LEIERMKQMHQKDREDQEEELEDVRQSCQKRLHQLEMQLEQEYEEKQMVLHEKQDLEGLIGTLCD 1830
            .:||:.|.:.||:.:|...:::   |..:.|:.|  .:|.::||.:...|.:|.|.:.      .
 Worm  1222 AKIEKEKGVLQKELDDINAQVD---QETKSRVEQ--ERLAKQYEIQVAELQQKVDEQS------R 1275

Human  1831 QIGHRDFDVEKRLRRDLRRTHALLSDVQLLLGTMEDGKTSVSKEELEKVHSQLEQSEAKCEEALK 1895
            |||... ..:.||..|.......:.::::.|.|:...||:.|        |||.:::...|:.|.
 Worm  1276 QIGEYT-STKGRLSNDNSDLARQVEELEIHLATINRAKTAFS--------SQLVEAKKAAEDELH 1331

Human  1896 TQ-------KVLTADLESMHSELENMTRNKSLVDEQLYRLQFEKADLLKRIDED----QDDLNEL 1949
            .:       |.|..:|:..|..||.....|..:..||.|:..|.:....|.:.:    .::|.||
 Worm  1332 ERQEFHAACKNLEHELDQCHELLEEQINGKDDIQRQLSRINSEISQWKARYEGEGLVGSEELEEL 1396

Human  1950 MQKHKDLIAQSAADIGQIQELQLQLEEAKKEKHKLQEQLQVAQMRIEYLEQS-------TVD-RA 2006
            .:|..:.:..                        |||.|..||.::..||::       |.| |:
 Worm  1397 KRKQMNRVMD------------------------LQEALSAAQNKVISLEKAKGKLLAETEDARS 1437

Human  2007 IVSRQEAVICDLENKTE-FQKV--------------------QIKRFEVLVIRLRDSLIKMGEEL 2050
            .|.|...||..||.|.. |.|:                    ..:.....|.:||.|:..:.|::
 Worm  1438 DVDRHLTVIASLEKKQRAFDKIVDDWKRKVDDIQKEIDATTRDSRNTSTEVFKLRSSMDNLSEQI 1502

Human  2051 ----------SQAATSESQQ-RESSQYYQ------RRLEELKADMEELVQREAEASRRC------ 2092
                      ||.....::| .:..:.||      ||||:.|.:::..:. ||||:...      
 Worm  1503 ETLRRENKIFSQEIRDINEQITQGGRTYQEVHKSVRRLEQEKDELQHALD-EAEAALEAEESKVL 1566

Human  2093 ----------MELEKYV----EELAAVR-------QTLQTDLETSIRRIADLQAALEEVASSDSD 2136
                      .|:||.:    ||....|       :::|..|||..:..|:|..|.:::   ::|
 Worm  1567 RLQIEVQQIRSEIEKRIQEKEEEFENTRKNHQRALESIQASLETEAKSKAELARAKKKL---ETD 1628

Human  2137 TESVQTA--------VDCGSSGRKEMDNVSILSSQ-------PEGSLQSWLSCTLSLATDTMRTP 2186
            ...::.|        ||...:.:|..|.|..|..|       .|...:::|:....||.      
 Worm  1629 INQLEIALDHANKANVDAQKNLKKLFDQVKELQGQVDDEQRRREEIRENYLAAEKRLAI------ 1687

Human  2187 SRQSATSSRILSPRINEEAGDTERTQSALALSRARSTNVHSKTSGDKPVSPHFVRRQKYCHFGDG 2251
               :.:.|..|:.||  ||.|..:.|..:..:..:|:|...                    .|:.
 Worm  1688 ---ALSESEDLAHRI--EASDKHKKQLEIEQAELKSSNTEL--------------------IGNN 1727

Human  2252 EVL-AVQRKSTERLEPASSPLASRSTNTSPLSREKLPSPSAALSEFVEGLRRKR 2304
            ..| |::||....::.|.:.| ....|....|.|:....:|......|.:|:::
 Worm  1728 AALSAMKRKVENEVQIARNEL-DEYLNELKASEERARKAAADADRLAEEVRQEQ 1780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MYO18BXP_011528760.1 2A1904 <263..555 CDD:273344 8/24 (33%)
COG5022 552..2129 CDD:227355 411/1789 (23%)
MYSc_Myo18 627..1364 CDD:276837 188/791 (24%)
myo-1NP_492053.1 Myosin_N 30..73 CDD:460670 11/51 (22%)
MYSc_class_II 98..773 CDD:276951 188/791 (24%)
Myosin_tail_1 854..1919 CDD:460256 219/1030 (21%)

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