DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMARCA5 and ISW2

DIOPT Version :10

Sequence 1:NP_003592.3 Gene:SMARCA5 / 8467 HGNCID:11101 Length:1052 Species:Homo sapiens
Sequence 2:NP_014948.1 Gene:ISW2 / 854480 SGDID:S000005831 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:1091 Identity:531/1091 - (48%)
Similarity:714/1091 - (65%) Gaps:85/1091 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     2 SSAAEPPPPPPPESAPSKPAASIASGGSNSSNKGGPEGVAAQAVASAASAGPADAEMEEIFDDAS 66
            :|.:|.|.....::..||     ::|.|:..|.|..|.:             :|.|:..: :|..
Yeast    14 NSKSESPSEVLVDTLDSK-----SNGSSDDDNIGQSEEL-------------SDKEIYTV-EDRP 59

Human    67 P-----GKQKEIQEPDPTY-EEKMQTDRANRFEYLLKQTELFAHFIQPAAQ--KTPTSPLKMKPG 123
            |     .|:|.:.:.||.| ::|.::|...||:|||..|:||.|||...|:  |.....||....
Yeast    60 PEYWAQRKKKFVLDVDPKYAKQKDKSDTYKRFKYLLGVTDLFRHFIGIKAKHDKNIQKLLKQLDS 124

Human   124 RPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFED-----SPSYVKWGKLRDY 183
            ... |..:..:.:|.....||:||:|||.||:.:..:.. |.|..||     |||:||.||||||
Yeast   125 DAN-KLSKSHSTVSSSSRHHRKTEKEEDAELMADEEEEI-VDTYQEDIFVSESPSFVKSGKLRDY 187

Human   184 QVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEF 248
            ||:||||||||:||.::|||||||||||||||||.|||:::.:.|.||.:::||||||.||..||
Yeast   188 QVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREF 252

Human   249 KRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRI 313
            .:|.|.:..:.|.|||:.||..||:::|...:||.:|||||:|:||:..|:..|:|:||||||||
Yeast   253 LKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRI 317

Human   314 KNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQ 378
            |||:|.||:|:|.|.:.||||:|||||||||||||:||||||||:|..::.||.||:.||...||
Yeast   318 KNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQ 382

Human   379 KLV-ERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSA-GKM 441
            ::| ::||.||.||||||:||||||||.||.|..:|||::.||.:||..:|.||||.:|.| ||.
Yeast   383 EIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKR 447

Human   442 D-KMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIF 505
            : |.|||||:|||||||||||||:|||||||||||.||:.|||||::|||||.:|||:|||||||
Yeast   448 EGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKMIILDKLLKRLKEKGSRVLIF 512

Human   506 SQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLAT 570
            |||:|:||||||||.:|::||||:||.|.|:||.::|:.||:|||.||||:|:||||||||||.|
Yeast   513 SQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVT 577

Human   571 ADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQG 635
            ||.|||:|||||||.|||||||||||||.|.|.|:||:|:|.:||:::|||..|||||.:|||||
Yeast   578 ADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQG 642

Human   636 RLVDQNLNKIG--KDEMLQMIRHGATHVFASKESEIT-DEDIDGILERGAKKTAEMNEKLSKMGE 697
              ..:....:|  ||::|.||:.||.::|..|.|::| |.|||.||::|.:||.|:|.|...:|.
Yeast   643 --TGKKTASLGNSKDDLLDMIQFGAKNMFEKKASKVTVDADIDDILKKGEQKTQELNAKYQSLGL 705

Human   698 SSLRNFTMDTESSVYNFEGEDYREKQKIAFTEWIEPPKRERK---ANYAVDAYFREALRVSEPKA 759
            ..|:.|......|.|.:.|:.:::|......|||.|.:|||:   ..|:||.|::|.:......|
Yeast   706 DDLQKFNGIENQSAYEWNGKSFQKKSNDKVVEWINPSRRERRREQTTYSVDDYYKEIIGGGSKSA 770

Human   760 ------PKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIGYKVP--------RNP------ 804
                  |||||.||..:.|||||||..|..|.|||.|:::|.:.|||.        ||.      
Yeast   771 SKQTPQPKAPRAPKVIHGQDFQFFPKELDALQEKEQLYFKKKVNYKVTSYDITGDIRNEGSDAEE 835

Human   805 ---ELPNAAQAQ------------KEEQLKIDEAESLNDEELEEKEKLLTQGFTNWNKRDFNQFI 854
               |..|||..:            :|||.||:.|.....|:...|::|:::.|||||||||..||
Yeast   836 EEGEYKNAANTEGHKGHEELKRRIEEEQEKINSAPDFTQEDELRKQELISKAFTNWNKRDFMAFI 900

Human   855 KANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKK 919
            .|..|:||||:|||.:.::.||||||..|:.:||||..|:...||.:..:|.||.:.::....:.
Yeast   901 NACAKYGRDDMENIKKSIDSKTPEEVEVYAKIFWERLKEINGWEKYLHNVELGEKKNEKLKFQET 965

Human   920 ALDTKIGRYKAPFHQLRISYGTNKG-KNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQF 983
            .|..||.:.|.|.|:|.|.|..|.. :.|...||:||:..::|.|...:.:|::|:|.|..|..|
Yeast   966 LLRQKIEQCKHPLHELIIQYPPNNARRTYNTLEDKFLLLAVNKYGLRADKLYEKLKQEIMMSDLF 1030

Human   984 RFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQK 1034
            .||||:|:||..||.:|.:||:|||.||    .|:..|.||||....:|::
Yeast  1031 TFDWFIKTRTVHELSKRVHTLLTLIVRE----YEQPDANKKKRSRTSATRE 1077

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCA5NP_003592.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83 19/86 (22%)
PLN03142 69..1012 CDD:215601 509/995 (51%)
DEAH box 308..311 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1015..1052 7/20 (35%)
ISW2NP_014948.1 PLN03142 1..1093 CDD:215601 531/1091 (49%)

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