DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SMARCA5 and ISW1

DIOPT Version :10

Sequence 1:NP_003592.3 Gene:SMARCA5 / 8467 HGNCID:11101 Length:1052 Species:Homo sapiens
Sequence 2:NP_009804.1 Gene:ISW1 / 852547 SGDID:S000000449 Length:1129 Species:Saccharomyces cerevisiae


Alignment Length:1067 Identity:510/1067 - (47%)
Similarity:686/1067 - (64%) Gaps:80/1067 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    50 SAGPADAEMEEIFDDASPGKQKEIQEPDPTYEEKMQTDR-AN-----------RFEYLLKQTELF 102
            |:|......||..::..| .|..:...||...:|....: ||           |||:||..:.||
Yeast    56 SSGSIMTASEEYLENLKP-FQVGLPPHDPESNKKRYLLKDANGKKFDLEGTTKRFEHLLSLSGLF 119

Human   103 AHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVG---DYRHRRTEQEEDEELLTE--SSKAT 162
            .|||:..|.|.|.....:.     :.::.|.|....|   |.|.|:||.|||.|||.|  |....
Yeast   120 KHFIESKAAKDPKFRQVLD-----VLEENKANGKGKGKHQDVRRRKTEHEEDAELLKEEDSDDDE 179

Human   163 NVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRN 227
            ::..:|.:||:||. |:||.||::|:|||:||::|.|.|||||||||||||||||.|||:::...
Yeast   180 SIEFQFRESPAYVN-GQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEK 243

Human   228 IPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIK 292
            ||||.:|:.|||||:||:.|..||.|.:.:..|.||||:||..::..||..::||.:.|||::|:
Yeast   244 IPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIR 308

Human   293 EKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPD 357
            |||..||.||.|::||||||||||:|.||:::|||.:.||||:|||||||||||||:||||||||
Yeast   309 EKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPD 373

Human   358 VFNSADDFDSWFDTNNCLGDQ-KLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQR 421
            :|:.|.|||.||.:.:...|| |:|::||.||:||||||||:|||.||.||||:.:|||:|.||:
Yeast   374 IFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQK 438

Human   422 EWYTRILMKDIDILN--SAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGK 484
            :||.:||.||:|.:|  :..|..|.|||||:|||||||||||||||||||||||||.|||.|:.|
Yeast   439 KWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEHLVYNAAK 503

Human   485 MVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPN 549
            :.||||||.||||:||||||||||:|:||||||||.:|||||||:||.|.|::|..:|:.||.|:
Yeast   504 LQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPD 568

Human   550 STKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE 614
            |.||||:|:||||||||||.:||||:|||||||||.|||||||||||||.|.|:|||.:|||:||
Yeast   569 SKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVE 633

Human   615 ERIVERAEMKLRLDSIVIQQGRL-VDQNLNKI-GKDEMLQMIRHGATHVFASKES---------- 667
            |:|:|||..|||||.:||||.|. :.:..||. .||.:|.||:|||..||.|..|          
Yeast   634 EKILERATQKLRLDQLVIQQNRTSLKKKENKADSKDALLSMIQHGAADVFKSGTSTGSAGTPEPG 698

Human   668 ---EITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREK--QKIAF 727
               :..|.|:|.:|.:...||..:|.|...:|...|:.|..|   |.|.:.|:|:::|  :.|..
Yeast   699 SGEKGDDIDLDELLLKSENKTKSLNAKYETLGLDDLQKFNQD---SAYEWNGQDFKKKIQRDIIS 760

Human   728 TEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFY 792
            ...:.|.|||||.||::|.|:::.|.......|..||.||.......|..||:|..|.|||.::.
Yeast   761 PLLLNPTKRERKENYSIDNYYKDVLNTGRSSTPSHPRMPKPHVFHSHQLQPPQLKVLYEKERMWT 825

Human   793 RKTIGYKVPRNPELPNA--------AQAQKEEQLK--IDEAESLNDEELEEKEKLLTQGFTNWNK 847
            .|..|| ||...::..|        .:.||.|.||  ::.::.|.:||.:.|....::|||||||
Yeast   826 AKKTGY-VPTMDDVKAAYGDISDEEEKKQKLELLKLSVNNSQPLTEEEEKMKADWESEGFTNWNK 889

Human   848 RDFNQFIKANEKWGRDDIENIAREV-EGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARI 911
            .:|.:||..:.|:||:.|:.||||: .|||.|||..|:..||.....::|.||.:..||..|.:|
Yeast   890 LEFRKFITVSGKYGRNSIQAIARELAPGKTLEEVRAYAKAFWSNIERIEDYEKYLKIIENEEEKI 954

Human   912 QRRISIKKALDTKIGRYKAPFHQLRISY--GTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELR 974
            :|....::||..|:..||.||..|::.:  .:|..:.|:||||||::.||.|.|.|:::||:.:|
Yeast   955 KRVKMQQEALRRKLSEYKNPFFDLKLKHPPSSNNKRTYSEEEDRFILLMLFKYGLDRDDVYELVR 1019

Human   975 QCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERE---NMELEEKEKAEKKKR---------- 1026
            ..||:.|.|..|::.:|||.:||.||.|||:..:|:|   .:.|::..|...||.          
Yeast  1020 DEIRDCPLFELDFYFRSRTPVELARRGNTLLQCLEKEFNAGIVLDDATKDRMKKEDENGKRIREE 1084

Human  1027 -GPKPSTQKRKMDGAPDGRGRKKKLKL 1052
             ..:.:.:|..:||.     ..||.|:
Yeast  1085 FADQTANEKENVDGV-----ESKKAKI 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SMARCA5NP_003592.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..83 8/32 (25%)
PLN03142 69..1012 CDD:215601 495/995 (50%)
DEAH box 308..311 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1015..1052 9/47 (19%)
ISW1NP_009804.1 PLN03142 108..1057 CDD:215601 488/958 (51%)

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