DRSC/TRiP Functional Genomics Resources

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Protein Alignment GLYR1 and Jasper

DIOPT Version :10

Sequence 1:NP_115958.2 Gene:GLYR1 / 84656 HGNCID:24434 Length:553 Species:Homo sapiens
Sequence 2:NP_651768.1 Gene:Jasper / 43576 FlyBaseID:FBgn0039743 Length:475 Species:Drosophila melanogaster


Alignment Length:231 Identity:64/231 - (27%)
Similarity:96/231 - (41%) Gaps:46/231 - (19%)


- Green bases have known domain annotations that are detailed below.


Human     2 AAVSLRLGDLVWGKLGRYPPWPGKIVNPPKDLKKPRGKKCFFVKFFGTEDHAWIKVEQLKPYHAH 66
            ||.|..:||||:.|:..|||||.||.       |....|.:.|.|:||.:.|.||:|.|.||.::
  Fly     6 AAASYSIGDLVFAKVKGYPPWPAKIT-------KSNNNKKYNVYFYGTGETANIKLEDLFPYASN 63

Human    67 KEEMI--KINKGKRFQQAVDAVEEFLR--------RAKGKDQTSSHNSSDDKNRRNSSEERSRPN 121
            ||...  ||.|..:|.:|:|.:|..||        ...|.:..:...:.|     ....|..:|.
  Fly    64 KERFATEKIMKRAKFIEAIDQIESALRGEDSAPIDLLDGAEPVAPPTTGD-----GVKTEEPKPE 123

Human   122 SGDEKRKLSLSEGKVKKNMGEGKKRVSS------GSSERGSKSPLKRAQEQSPRKRGRPPKDEKD 180
            .|.|....:......:|....|.::..:      |.||.|::.              .||..::.
  Fly   124 PGPEPATAAPVAAAAEKPKKSGTRKTKAPPRHVDGDSEAGAEL--------------APPPAKRR 174

Human   181 LTIPESSTVKGMMAGPMAAFKWQPTAS-EPVKDADP 215
            :.....:|...:.|.|.||   .||:| :.||.:.|
  Fly   175 VPTEGLATAAAIPAAPAAA---TPTSSKKSVKKSKP 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GLYR1NP_115958.2 PWWP_GLYR1 6..90 CDD:438961 34/85 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 92..188 14/101 (14%)
DUF4603 110..>173 CDD:464684 10/68 (15%)
Rossmann-fold NAD(P)(+)-binding proteins <210..>302 CDD:473865 3/6 (50%)
Interaction with histone H3. /evidence=ECO:0000269|PubMed:23260659 214..217 1/2 (50%)
Interaction with KDM1B. /evidence=ECO:0000269|PubMed:23260659, ECO:0007744|PDB:4GUR, ECO:0007744|PDB:4GUS, ECO:0007744|PDB:4GUT, ECO:0007744|PDB:4GUU 216..225 64/231 (28%)
Dehydrogenase domain. /evidence=ECO:0000305|PubMed:30970244 261..553
MmsB 268..551 CDD:441687
JasperNP_651768.1 PWWP_HRP 10..86 CDD:438959 33/82 (40%)
LEDGF 320..440 CDD:463284
Blue background indicates that the domain is not in the aligned region.

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