DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Fgl2 and CG31832

DIOPT Version :9

Sequence 1:	NP_445907.2	Gene:	Fgl2 / 84586	RGDID:	620170	Length:	429	Species:	Rattus norvegicus
Sequence 2:	NP_723894.2	Gene:	CG31832 / 318970	FlyBaseID:	FBgn0051832	Length:	227	Species:	Drosophila melanogaster

Alignment Length:	246	Identity:	93/246 - (37%)
Similarity:	128/246 - (52%)	Gaps:	45/246 - (18%)

- Green bases have known domain annotations that are detailed below.

  Rat   184 CPSQEHNQPNPVQHLIYKDCSDYYVLGKRSSGTYRVTPDHRNSSFEVYCDMETTGGGWTVLQARL 248
            |||   ..||.:..|:..:                      ...|:| ...:||...|.|:|.||
  Fly    25 CPS---GSPNGIHQLMLPE----------------------EEPFQV-TQCKTTARDWIVIQRRL 63

  Rat   249 DGSTNFTRGWKDYKAGFGNLEREFWLGNDKIHLLTKSKEMILRIDLEDFNGLTLYAVYDQFYVAN 313
            |||.||.:.|..||.|||:...||::|..|::|:|:.:...|.|.|:...|.|:||.:|.|.|.:
  Fly    64 DGSVNFNQSWFSYKDGFGDPNGEFFIGLQKLYLMTREQPHELFIQLKHGPGATVYAHFDDFQVDS 128

  Rat   314 EFLKYRL-HLGNYNGTAGDALRFSRHYNHDLRFFTTPDRDNDRYPSGNCGLYYSSGWWFDACLSA 377
            |...|:| .:|.|:|||||:||:  |.|   :.|:|.|||||. .|.||...:..||||.:|||:
  Fly   129 ETELYKLERVGKYSGTAGDSLRY--HIN---KRFSTFDRDNDE-SSKNCAAEHGGGWWFHSCLSS 187

  Rat   378 NLNGKYYHQRYKGVRNGIFWGTWPGVSQAHPGGYKF-SFKKAKMMIRPKSF 427
            :|||.|:.:...|:.|||.||.|           || |....::|||||.|
  Fly   188 SLNGLYFREGETGMLNGIHWGRW-----------KFQSLTFVQIMIRPKYF 227

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Fgl2	NP_445907.2	ApoLp-III_like	<71..177	CDD:304399
Fgl2	NP_445907.2	Fibrinogen_C	199..425	CDD:278572	84/227 (37%)
CG31832	NP_723894.2	FReD	28..225	CDD:238040	87/236 (37%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG2579
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	163	1.000	Inparanoid score	I4104
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X25
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.860