DRSC/TRiP Functional Genomics Resources

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Protein Alignment DOC2A and Sytalpha

DIOPT Version :10

Sequence 1:NP_003577.2 Gene:DOC2A / 8448 HGNCID:2985 Length:400 Species:Homo sapiens
Sequence 2:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster


Alignment Length:315 Identity:95/315 - (30%)
Similarity:146/315 - (46%) Gaps:40/315 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    91 GTLEFDLLYDRASCTLHCSILRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTKTQRNTLNPV 155
            |.|...|.||.....|:..:|.|:.|:|..|:|.||||.|:.|||.  |.|..:|:..:.|||||
  Fly   220 GNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPD--KKNFWQTRIHKRTLNPV 282

Human   156 WNEDLTYSGITDDDITHKVLRIAVCDEDKLSHNEFIGEIRVPLRRLKPSQKKHF-NICLERQVPL 219
            ::|...:. :|...|..:.:.|.:.|.|..|.:..||           ..|.|. |:.|..|:.|
  Fly   283 FDEQFVFE-VTAGVIDKRTVEILLYDFDAYSRHVCIG-----------GSKLHLANLDLSEQLKL 335

Human   220 ASPSSMSAALRGISCYLKELEQAEQGQGLLEERGRILLSLSYSSRRRGLLVGILRCAHLAAM-DV 283
            .:|.|.::|                 |.:..:.|.|::||:|......|:|.:::..:|..: |.
  Fly   336 WTPLSSASA-----------------QDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDA 383

Human   284 NGYSDPYVK-TYLRPDVDKKSKHKTCVKKKTLNPEFNEEFFYEIELSTLATKTLEVTVWDYDIGK 347
            ...|||||| |.|.|...|..|.||.|::.||||.:||...:::...||....||.||....:..
  Fly   384 RNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLG 448

Human   348 SNDFIGGVSLG--PGARGEARKHWSDCLQQPDAALERWHTLTSELPPAAGALSSA 400
            |::.:|...:|  |..|.|.:..:.:..:..:|..: |..|..   ||....:||
  Fly   449 SSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQ-WVPLQE---PANNLATSA 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DOC2ANP_003577.2 Interaction with UNC13D and DYNLT1. /evidence=ECO:0000269|PubMed:18354201, ECO:0000269|PubMed:9804756 1..89
C2A_Rabphilin_Doc2 90..213 CDD:176000 40/122 (33%)
Interaction with UNC13D. /evidence=ECO:0000269|PubMed:18354201 215..400 52/188 (28%)
C2B_Rabphilin_Doc2 254..386 CDD:176030 42/135 (31%)
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 44/134 (33%)
C2B_Synaptotagmin 352..488 CDD:175975 43/136 (32%)
Blue background indicates that the domain is not in the aligned region.

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