DRSC/TRiP Functional Genomics Resources

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Protein Alignment L3MBTL3 and mbtr-1

DIOPT Version :9

Sequence 1:XP_006715639.1 Gene:L3MBTL3 / 84456 HGNCID:23035 Length:815 Species:Homo sapiens
Sequence 2:NP_001122542.1 Gene:mbtr-1 / 171624 WormBaseID:WBGene00021661 Length:564 Species:Caenorhabditis elegans


Alignment Length:424 Identity:94/424 - (22%)
Similarity:162/424 - (38%) Gaps:97/424 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   222 GEERDDEME--NKQDVRILRGSQRARRKRRGDSAVLKQGLPPKGKKAWCWASYLEE------EKA 278
            |.::|..|:  ..:.:.:|:..|..:..|||.:..     ||..:..   ...|:|      |..
 Worm   166 GLKQDPAMKWLQYRPLSLLKPMQCPKFWRRGSTPA-----PPVPRPT---EEILDEFQAELHENR 222

Human   279 VAVPAKLFKEHQSFPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYS------ 337
            ::.| |:|.:.:...:..:.|::..::|.::....:...|..:..:.|.|:.:......      
 Worm   223 ISEP-KIFDQLRHLAHRPSRFRLNQRVELLNYLEPTEIRVARILRILGRRLMVMVTAQDYPEDLP 286

Human   338 -----------DCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQ----TYLK---TC 384
                       :..:|||:..:..:.|||:....|.:....:||.|......    :|.|   |.
 Worm   287 SVEAKDRQVQHENVEFWVDESSFFLFPVGFAMINGLRTKATEGYLEHSRRIAEGSGSYHKDDVTF 351

Human   385 KAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKN---PSFICVATV----------------TD 430
            :...|.|.....:.:.::    :||.|.|.:|..:   .|| ||||:                |:
 Worm   352 EQLFAGKPDISAEKLNLL----KVGQKFELLDPLSDLRQSF-CVATIRKICKTPGFLIISPDETE 411

Human   431 MVDNRFLVHFDNWDESYDYWCEASSPH-IHPVGWCKEH----RRTLITPPGYPNVKHFSWDKYLE 490
            ..|..|.:|.||              | :||||:.::.    .|...|.||     .|.|:.||:
 Worm   412 SDDESFPIHIDN--------------HFMHPVGYAEKFGIKLDRLAGTEPG-----KFKWEGYLK 457

Human   491 ETNSLPAPARAFKVKPP----HGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCY 551
            |..:...|....:..|.    |.|:....||.|.:....:|..|:|.:.....|.:.|.||::.:
 Worm   458 EKQAEKIPDEMLRPLPSKERRHMFEFGRVLEAVGQNETYWISPASVEEVHGRTVLIEFQGWDSEF 522

Human   552 DYWIDADSPDIHPVGWCS----KTGHPLQPPLSP 581
            ....|.||.|:.|.|||.    |..||:.|...|
 Worm   523 SELYDMDSHDLLPAGWCEFFNFKLRHPVLPVNDP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L3MBTL3XP_006715639.1 MBT 271..367 CDD:214723 18/118 (15%)
MBT 380..474 CDD:214723 28/120 (23%)
MBT 486..578 CDD:214723 28/99 (28%)
zf-C2HC 592..619 CDD:279824
SAM 740..806 CDD:197735
SAM_Scm-like-3MBT3,4 740..805 CDD:188981
mbtr-1NP_001122542.1 MBT 75..164 CDD:302657
MBT 217..326 CDD:214723 16/109 (15%)
MBT 374..439 CDD:280910 20/79 (25%)
MBT 453..540 CDD:214723 24/86 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161457469
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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