DRSC/TRiP Functional Genomics Resources

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Protein Alignment L3MBTL3 and mbtr-1

DIOPT Version :10

Sequence 1:XP_006715639.1 Gene:L3MBTL3 / 84456 HGNCID:23035 Length:815 Species:Homo sapiens
Sequence 2:NP_001122542.1 Gene:mbtr-1 / 171624 WormBaseID:WBGene00021661 Length:564 Species:Caenorhabditis elegans


Alignment Length:424 Identity:94/424 - (22%)
Similarity:162/424 - (38%) Gaps:97/424 - (22%)


- Green bases have known domain annotations that are detailed below.


Human   222 GEERDDEME--NKQDVRILRGSQRARRKRRGDSAVLKQGLPPKGKKAWCWASYLEE------EKA 278
            |.::|..|:  ..:.:.:|:..|..:..|||.:..     ||..:..   ...|:|      |..
 Worm   166 GLKQDPAMKWLQYRPLSLLKPMQCPKFWRRGSTPA-----PPVPRPT---EEILDEFQAELHENR 222

Human   279 VAVPAKLFKEHQSFPYNKNGFKVGMKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYS------ 337
            ::.| |:|.:.:...:..:.|::..::|.::....:...|..:..:.|.|:.:......      
 Worm   223 ISEP-KIFDQLRHLAHRPSRFRLNQRVELLNYLEPTEIRVARILRILGRRLMVMVTAQDYPEDLP 286

Human   338 -----------DCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQ----TYLK---TC 384
                       :..:|||:..:..:.|||:....|.:....:||.|......    :|.|   |.
 Worm   287 SVEAKDRQVQHENVEFWVDESSFFLFPVGFAMINGLRTKATEGYLEHSRRIAEGSGSYHKDDVTF 351

Human   385 KAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKN---PSFICVATV----------------TD 430
            :...|.|.....:.:.::    :||.|.|.:|..:   .|| ||||:                |:
 Worm   352 EQLFAGKPDISAEKLNLL----KVGQKFELLDPLSDLRQSF-CVATIRKICKTPGFLIISPDETE 411

Human   431 MVDNRFLVHFDNWDESYDYWCEASSPH-IHPVGWCKEH----RRTLITPPGYPNVKHFSWDKYLE 490
            ..|..|.:|.||              | :||||:.::.    .|...|.||     .|.|:.||:
 Worm   412 SDDESFPIHIDN--------------HFMHPVGYAEKFGIKLDRLAGTEPG-----KFKWEGYLK 457

Human   491 ETNSLPAPARAFKVKPP----HGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCY 551
            |..:...|....:..|.    |.|:....||.|.:....:|..|:|.:.....|.:.|.||::.:
 Worm   458 EKQAEKIPDEMLRPLPSKERRHMFEFGRVLEAVGQNETYWISPASVEEVHGRTVLIEFQGWDSEF 522

Human   552 DYWIDADSPDIHPVGWCS----KTGHPLQPPLSP 581
            ....|.||.|:.|.|||.    |..||:.|...|
 Worm   523 SELYDMDSHDLLPAGWCEFFNFKLRHPVLPVNDP 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
L3MBTL3XP_006715639.1 MBT_L3MBTL3_rpt1 294..394 CDD:439122 20/123 (16%)
MBT_L3MBTL3_rpt2 401..493 CDD:439125 31/115 (27%)
MBT_L3MBTL3_rpt3 502..579 CDD:439128 25/84 (30%)
SAM_Scm-like-3MBT3,4 740..805 CDD:188981
mbtr-1NP_001122542.1 MBT 96..>164 CDD:459242
MBT 217..326 CDD:214723 16/109 (15%)
MBT_dSfmbt-like_rpt3 369..460 CDD:439089 31/114 (27%)
MBT 479..549 CDD:459242 21/69 (30%)
Blue background indicates that the domain is not in the aligned region.

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