DRSC/TRiP Functional Genomics Resources

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Protein Alignment NCK2 and nck2b

DIOPT Version :9

Sequence 1:NP_001004720.1 Gene:NCK2 / 8440 HGNCID:7665 Length:380 Species:Homo sapiens
Sequence 2:NP_001003492.2 Gene:nck2b / 445098 ZFINID:ZDB-GENE-040801-235 Length:380 Species:Danio rerio


Alignment Length:383 Identity:312/383 - (81%)
Similarity:345/383 - (90%) Gaps:6/383 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MTEEVIVIAKWDYTAQQDQELDIKKNERLWLLDDSKTWWRVRNAANRTGYVPSNYVERKNSLKKG 65
            |:||.||||||||||||||||||:|||||||||||||||||||.:||||||||||||||||||||
Zfish     1 MSEEAIVIAKWDYTAQQDQELDIRKNERLWLLDDSKTWWRVRNTSNRTGYVPSNYVERKNSLKKG 65

Human    66 SLVKNLKDTLGLGKTRRKTSARDASPTPSTDAEYPANGSGADRIYDLNIPAFVKFAYVAEREDEL 130
            |||||||||||||||:||||.|:|||||||| ||.:||.||:||||||.||.|||||.|||||||
Zfish    66 SLVKNLKDTLGLGKTKRKTSTREASPTPSTD-EYSSNGGGAERIYDLNTPAIVKFAYNAEREDEL 129

Human   131 SLVKGSRVTVMEKCSDGWWRGSYNGQIGWFPSNYVL-EEVDEAAAESPSFLSLRKGASLSNGQGS 194
            ||||||||.||||||||||||||:||:||||||||. ||:::.:|:.|:..|.:.|  |||||.|
Zfish   130 SLVKGSRVMVMEKCSDGWWRGSYSGQMGWFPSNYVQEEEMEDTSADLPAVFSSQPG--LSNGQSS 192

Human   195 RVLHVVQTLYPFSSVTEEELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDGP 259
            ||||.|||||||||||||||||||||.|||:||||||||||:|||.|||||||||||||||:|||
Zfish   193 RVLHSVQTLYPFSSVTEEELNFEKGEIMEVLEKPENDPEWWRCKNCRGQVGLVPKNYVVVLNDGP 257

Human   260 --ALHPAHAPQISYTGPSSSGRFAGREWYYGNVTRHQAECALNERGVEGDFLIRDSESSPSDFSV 322
              ....:|:.|.|:||||.:|.|||::||||:||||||||||||||||||||:||||||||||||
Zfish   258 LSTASGSHSQQNSHTGPSHTGLFAGKDWYYGSVTRHQAECALNERGVEGDFLVRDSESSPSDFSV 322

Human   323 SLKASGKNKHFKVQLVDNVYCIGQRRFHTMDELVEHYKKAPIFTSEHGEKLYLVRALQ 380
            ||||.||||||||||.:.|||||||||::||||:|||||||||||||||||||::.||
Zfish   323 SLKAVGKNKHFKVQLSNEVYCIGQRRFNSMDELLEHYKKAPIFTSEHGEKLYLIKPLQ 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NCK2NP_001004720.1 SH3_Nck2_1 2..59 CDD:212832 51/56 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..102 17/22 (77%)
SH3_Nck2_2 114..168 CDD:212835 46/54 (85%)
SH3_Nck2_3 198..256 CDD:212836 52/57 (91%)
SH2_Nck2 283..380 CDD:198272 82/96 (85%)
nck2bNP_001003492.2 SH3_Nck2_1 2..59 CDD:212832 51/56 (91%)
SH3_Nck2_2 114..167 CDD:212835 46/52 (88%)
SH3_Nck2_3 196..254 CDD:212836 52/57 (91%)
SH2_Nck2 283..380 CDD:198272 82/96 (85%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194327428
Domainoid 1 1.000 144 1.000 Domainoid score I18618
eggNOG 1 0.900 - - E1_KOG4226
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20794
Inparanoid 1 1.050 641 1.000 Inparanoid score I4851
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46567
OrthoDB 1 1.010 - - D1097449at2759
OrthoFinder 1 1.000 - - FOG0002240
OrthoInspector 1 1.000 - - oto45738
orthoMCL 1 0.900 - - OOG6_106243
Panther 1 1.100 - - O PTHR19969
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4150
SonicParanoid 1 1.000 - - X1672
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1818.300

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