DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT1G74240 and sea

DIOPT Version :10

Sequence 1:NP_177564.2 Gene:AT1G74240 / 843764 AraportID:AT1G74240 Length:364 Species:Arabidopsis thaliana
Sequence 2:NP_001027175.1 Gene:sea / 3772221 FlyBaseID:FBgn0037912 Length:317 Species:Drosophila melanogaster


Alignment Length:307 Identity:90/307 - (29%)
Similarity:134/307 - (43%) Gaps:39/307 - (12%)


- Green bases have known domain annotations that are detailed below.


plant    39 GGIAGAFGEGMMHPVDTLKTRLQSQIIMNATQRQKSILQMLRTVWVGD-GLKGFYRGIAPGVTGS 102
            |||.|.....:.:|.:.:||:||.. ...|.::...|...::.. ||: |..|.|||::..|.||
  Fly    40 GGITGGIEICITYPTEYVKTQLQLD-EKGAAKKYNGIFDCVKKT-VGERGFLGLYRGLSVLVYGS 102

plant   103 LATGATYFGFIESTKKWIEESHPSLAGHWAHFIAGAVGDTLGSFIYV-PCEVIKQRMQIQGTSSS 166
            :...|..||..|..|....:|...|:.. ...:.|.......:.:.| |.|.||.:         
  Fly   103 IPKSAARFGAFEFLKSNAVDSRGQLSNS-GKLLCGLGAGVCEAIVAVTPMETIKVK--------- 157

plant   167 WSSYIS--RNSVPVQPRGDMYGYYTGMFQAGCSIWKEQGPKGLYAGYWSTLARDVPFAGLMVVFY 229
               :|:  |:..|     ...|:..|:.|    |.|.:|..|:|.|...|:.:......:.....
  Fly   158 ---FINDQRSGNP-----KFRGFAHGVGQ----IIKSEGISGIYKGLTPTILKQGSNQAIRFFVL 210

plant   230 EGLKDL--TDQGKKKFPQYGVNSSIEGLVLGGLAGGLSAYLTTPLDVVKTRLQ-VQGSTIKYKGW 291
            |.||||  .|...|..|:..|.      |.|.:||..|.:..|||||||||:| ::.|  |||..
  Fly   211 ESLKDLYKGDDHTKPVPKLVVG------VFGAIAGAASVFGNTPLDVVKTRMQGLEAS--KYKNT 267

plant   292 LDAVGQIWRKEGPQGFFRGSVPRVMWYLPASALTFMAVEFLRDNFRE 338
            .....:|.:.|||..|::|:|||:.......|:|||..:...|.|.:
  Fly   268 AHCAVEILKNEGPAAFYKGTVPRLGRVCLDVAITFMIYDSFMDLFNK 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G74240NP_177564.2 PTZ00168 34..332 CDD:185494 88/299 (29%)
Mito_carr 265..339 CDD:395101 30/75 (40%)
seaNP_001027175.1 Mito_carr 34..117 CDD:395101 25/78 (32%)
Mito_carr 125..220 CDD:395101 25/116 (22%)
Mito_carr 235..314 CDD:395101 33/80 (41%)

Return to query results.
Submit another query.