DRSC/TRiP Functional Genomics Resources

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Protein Alignment AT1G71980 and Rnf167

DIOPT Version :9

Sequence 1:NP_177343.2 Gene:AT1G71980 / 843529 AraportID:AT1G71980 Length:448 Species:Arabidopsis thaliana
Sequence 2:NP_081721.1 Gene:Rnf167 / 70510 MGIID:1917760 Length:347 Species:Mus musculus


Alignment Length:357 Identity:110/357 - (30%)
Similarity:170/357 - (47%) Gaps:53/357 - (14%)


- Green bases have known domain annotations that are detailed below.


plant     4 ALVLLLYVCTVSCLASSKVILMR----NNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLDACQN 64
            |..|.:.|.||...|:....|:|    :|.::.|.|:.|.|..::...|..|.:..|.|.:||..
Mouse     5 AFPLPVVVATVLWGAAPVRGLIRATSEHNASMDFADLPALFGATLSDEGLQGFLVEAHPENACGP 69

plant    65 LMNKPEQSSNETSPFVLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIAMAGNSGGIR--- 126
            :...|....|.:....|:.|..|:|:.||..||:||:.||::: |.:...|:.|..||..|:   
Mouse    70 IAPPPSAPVNGSVFIALLRRFDCNFDLKVLNAQKAGYGAAVVH-NVNSNELLNMVWNSEEIQQQI 133

plant   127 -IHAVFVTKETGEVLKE-YAGFPDTKVWLIP--SFENSAWSIMAVSFISLLAMSAVLATCFFVR- 186
             |.:||:.:.:.|.|:. :......:|.|:|  ||....:.|.....:.||.::  :.|...|| 
Mouse   134 WIPSVFIGERSAEYLRALFVYEKGARVLLVPDNSFPLGYYLIPFTGIVGLLVLA--MGTVLIVRC 196

plant   187 -RHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTAFTCAICLEDYTVGDKLRLLPC 250
             :||.|.:.:|         :::..:|.:|:..:....|.:    .|||||::|..|||||:|||
Mouse   197 IQHRKRLQRNR---------LTKEQLKQIPTHDYQKGDEYD----VCAICLDEYEDGDKLRVLPC 248

plant   251 CHKFHAACVDSWLTSWRTFCPVCKRDART-----------------STGEP---PASESTPLLSS 295
            .|.:|:.|||.|||..|..||:||:....                 ..|||   ||||.||||.|
Mouse   249 AHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQEEETQEQEEGDEGEPRDQPASEWTPLLGS 313

plant   296 AASSFTSSSLHSSVRSSALLI-GPSLGSLPTS 326
            :.:..||   ..|:..:.|:. |||....|.|
Mouse   314 SPTLPTS---FGSLAPAPLVFPGPSTDPSPPS 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G71980NP_177343.2 PA_C_RZF_like 11..161 CDD:239038 47/160 (29%)
zf-RING_2 230..274 CDD:290367 25/43 (58%)
Rnf167NP_081721.1 PA_C_RZF_like 20..170 CDD:239038 43/150 (29%)
zf-RING_2 228..272 CDD:290367 25/47 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..347 23/75 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 72 1.000 Domainoid score I3995
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41046
Inparanoid 1 1.050 138 1.000 Inparanoid score I2184
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1487241at2759
OrthoFinder 1 1.000 - - FOG0001489
OrthoInspector 1 1.000 - - mtm2018
orthoMCL 1 0.900 - - OOG6_103040
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X670
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.730

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