Protein Alignment AT1G71980 and rnf13

DIOPT Version :9

• Sequence 1: NP_177343.2
• Gene: AT1G71980 / 843529
• AraportID: AT1G71980
• Length: 448
• Species: Arabidopsis thaliana
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 338
• Identity: 112/338 - (33%)
• Similarity: 161/338 - (47%)
• Gaps: 73/338 - (21%)

plant     8 LLYVCTVSCLASSKVILMR--------NNITLSFDDIEANFAPSVKGTGEIGVVYVAEPLDACQN 64
            ||..|  ||||...::.::        :|::.:|||:.|.|...:...|..|.:..|:|.:|||.
 Frog    17 LLAFC--SCLAVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQP 79

plant    65 LMNKPEQSSNETSPF-VLIVRGGCSFEEKVRKAQRAGFKAAIIYDNEDRGTLIAMAGNS----GG 124
            :...|....|.:|.| |||.|..|:|:.||..||:||||||::| |.|...||:|..|.    ..
 Frog    80 ISPPPLLRDNTSSVFIVLIKRLECNFDLKVLNAQKAGFKAAVVY-NVDSDDLISMGSNDVDILKQ 143

plant   125 IRIHAVFVTKETGEVLK-----EYAGF----PD----TKVWLIPSFENSAWSIMAVSFISLLAMS 176
            |.|.:||:.:.:...||     |..|:    ||    .:.:|||             |:.::.:.
 Frog   144 IDIPSVFIGESSARFLKEEFSWEKGGYIVLVPDLTLPLEYYLIP-------------FLIIVGIC 195

plant   177 AVLATCFFVR-----RHRIRRRTSRSSRVREFHGMSRRLVKAMPSLIFSSFHEDNTTAFTCAICL 236
            .||...|.:.     |||.||...|..:           :|.:|...|....|.:    .||:||
 Frog   196 LVLIVIFMITKFVQDRHRARRNRLRKDQ-----------LKKLPIHKFKKGDEYD----VCAVCL 245

plant   237 EDYTVGDKLRLLPCCHKFHAACVDSWLTSWRTFCPVCKR-----------DARTSTGEPPASEST 290
            ::|..|||||:|||.|.:|..|||.|||..:..|||||:           |:.:|..:...||:|
 Frog   246 DEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSESDSDSSQEDNEVSENT 310

plant   291 PLLSSAASSFTSS 303
            |||...||:.|.|
 Frog   311 PLLRPMASASTQS 323

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
AT1G71980	NP_177343.2	PA_C_RZF_like	11..161	CDD:239038	58/175 (33%)
		zf-RING_2	230..274	CDD:290367	24/43 (56%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	52/157 (33%)
		RING_Ubox	239..284	CDD:388418	25/48 (52%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	71	1.000	Domainoid score	I4019
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	146	1.000	Inparanoid score	I2056
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		mtm3637
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	7	7.060