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Protein Alignment NAA38 and SmB
DIOPT Version :10
| Sequence 1: | NP_115732.2 |
Gene: | NAA38 / 84316 |
HGNCID: | 28212 |
Length: | 173 |
Species: | Homo sapiens |
| Sequence 2: | NP_001188780.1 |
Gene: | SmB / 34426 |
FlyBaseID: | FBgn0262601 |
Length: | 199 |
Species: | Drosophila melanogaster |
| Alignment Length: | 79 |
Identity: | 31/79 - (39%) |
| Similarity: | 42/79 - (53%) |
Gaps: | 9/79 - (11%) |
- Green bases have known domain annotations that are detailed below.
|
Human 97 LNKTMRIRMTDGRTLVGCFLCTDRDCNVILGSAQEFLKPSDSFS----AGEPRVLGLAMVPGHHI 157
||..:||.:.|.||.:|.|...|:..|:|||..:||.|.....| ..|.||||..::.|.:|
Fly 13 LNYRVRIVLQDSRTFIGTFKAFDKHMNLILGDCEEFRKIRSKNSKVPEREEKRVLGFVLLRGENI 77
Human 158 VSIEVQRESLTGPP 171
||:.|: |||
Fly 78 VSLTVE-----GPP 86
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| NAA38 | NP_115732.2 |
LSMD1 |
90..163 |
CDD:212486 |
27/69 (39%) |
| SmB | NP_001188780.1 |
Sm_B |
5..82 |
CDD:212464 |
27/68 (40%) |
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