DRSC/TRiP Functional Genomics Resources

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Protein Alignment VPS25 and VPS25

DIOPT Version :10

Sequence 1:NP_115729.1 Gene:VPS25 / 84313 HGNCID:28122 Length:176 Species:Homo sapiens
Sequence 2:NP_012636.1 Gene:VPS25 / 853566 SGDID:S000003863 Length:202 Species:Saccharomyces cerevisiae


Alignment Length:185 Identity:58/185 - (31%)
Similarity:93/185 - (50%) Gaps:27/185 - (14%)


- Green bases have known domain annotations that are detailed below.


Human     8 PWQYRFPPFFTLQPNVDTRQKQLAAWCSLVLSFCRLHKQSSM----TVMEAQE------------ 56
            |..|.|||.:|.|||..||::|::.|..::..:|:..|...|    ||:...|            
Yeast     5 PPVYSFPPLYTRQPNSLTRRQQISTWIDIISQYCKTKKIWYMSVDGTVINDNELDSGSTDNDDSK 69

Human    57 ---SPLFNNVKLQRKLPVESIQIVLEELRKKGNLEWLDKS--KSS------FLIMWRRPEEWGKL 110
               ..||||..:||.:....|..:..::.|:|....:|:|  :||      :.|:|:..:.|..|
Yeast    70 KISKNLFNNEDIQRSVSQVFIDEIWSQMTKEGKCLPIDQSGRRSSNTTTTRYFILWKSLDSWASL 134

Human   111 IYQWVSRSGQNNSVFTLYELTNGEDTEDEEFHGLDEATLLRALQALQQEHKAEII 165
            |.||...||:.|.|.|||||:.|::|.:.|||.:.|:.|...|:.|...::|.::
Yeast   135 ILQWFEDSGKLNQVITLYELSEGDETVNWEFHRMPESLLYYCLKPLCDRNRATML 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VPS25NP_115729.1 ESCRT-II 10..139 CDD:461763 49/155 (32%)
VPS25NP_012636.1 ESCRT-II 7..163 CDD:461763 57/183 (31%)

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