DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CASP10 and Casp8

DIOPT Version :9

Sequence 1:NP_116759.2 Gene:CASP10 / 843 HGNCID:1500 Length:522 Species:Homo sapiens
Sequence 2:NP_071613.1 Gene:Casp8 / 64044 RGDID:620945 Length:482 Species:Rattus norvegicus


Alignment Length:520 Identity:195/520 - (37%)
Similarity:275/520 - (52%) Gaps:63/520 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    18 VSFREKLLIIDSNLGVQDVENLKFLCIGLVPNKKLEKSSSASDVFEHLLAEDLLSEEDPFFLAEL 82
            :.|...|..|...||.:::..|||||:..:|.||.|..:....:|:.|..|.:|.|::..||.||
  Rat     1 MDFHSCLYDIAERLGNEELAALKFLCLDHIPQKKQESINDVLVLFQRLQEEGMLEEDNLSFLKEL 65

Human    83 LYIIRQKKLLQH-LNCTKEEVERLLPT--RQRVSLFRNLLYELSEGIDSENLKDMIFLLKDSLPK 144
            |:.|.::.||.. |..:.||:.|.|..  :.:||.:|.:|::|||.:|.|:||...|||...:||
  Rat    66 LFHISRRDLLSRVLKSSPEEMVRELQVLGKAQVSAYRVMLFKLSEDMDKEDLKSFKFLLITEIPK 130

Human   145 TEM----TSLSFLAFLEKQGKIDEDNLTCLEDLCKTVVPKLLRNIEKYKREKAIQIVTPPVDKEA 205
            .::    :.|.....:||:..:.|:||..|:.:|..|...||..|:.|:|..        .::..
  Rat   131 CKLQDNSSLLDIFVEMEKRTILAENNLVTLKSICFRVNRSLLGRIDDYERSS--------TERRM 187

Human   206 ESYQGEEELVSQTDVKTFLEALPQESWQNKHAGSNGNRATNGAPSLVSRGMQGASANTLNSETST 270
            .:..|||..||..|..|.   ..|:.|.                   |.|.|  .:.:|||:.  
  Rat   188 STEGGEELPVSVLDEVTI---KMQDMWD-------------------SPGEQ--ESESLNSDN-- 226

Human   271 KRAAVYRMNRNHRGLCVIVNNHSF----------TSLKDRQGTHKDAEILSHVFQWLGFTVHIHN 325
                ||:|....||.|:|.||::|          ::::||:||:.|.|.||..|:.|.|.:...:
  Rat   227 ----VYQMKSKPRGYCLIFNNNNFSKAREDIPKLSNMRDRKGTNYDEEALSKTFKELHFEIVSFS 287

Human   326 NVTKVEMEMVLQKQKCNPAHADGDCFVFCILTHGRFGAVYSSDEALIPIREIMSHFTALQCPRLA 390
            :.|..::..||...: :..|...|||:.|||:||..|.||.:|.....|.|:.|:||..:||.||
  Rat   288 DCTASQIHEVLVSYQ-SKDHKGKDCFICCILSHGDKGIVYGTDGKEASIYELTSYFTGSKCPSLA 351

Human   391 EKPKLFFIQACQGEEIQPSVSIEADALNPEQAPTSLQDS------IPAEADFLLGLATVPGYVSF 449
            .|||:||||||||...|.:|.: .|....||.....:||      ||.|||||||:|||...||:
  Rat   352 GKPKIFFIQACQGNNFQKAVPV-PDETGLEQEHVLEEDSSSYKNYIPDEADFLLGMATVKNCVSY 415

Human   450 RHVEEGSWYIQSLCNHLKKLVPRHEDILSILTAVNDDVSRRVDKQGTKKQMPQPAFTLRKKLVFP 514
            |....|:|||||||..|::..||.||||||||.||.|||.:.:.:...||||||.|||||||.||
  Rat   416 RDPTRGTWYIQSLCQSLRERCPRGEDILSILTGVNYDVSNKDNPRNMGKQMPQPIFTLRKKLFFP 480

Human   515  514
              Rat   481  480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CASP10NP_116759.2 DD 18..99 CDD:326335 28/81 (35%)
DED_Caspase_10_r2 112..190 CDD:260074 29/81 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 231..269 7/37 (19%)
CASc 276..514 CDD:214521 115/253 (45%)
Casp8NP_071613.1 DED_Caspase_8_r1 3..84 CDD:260041 28/80 (35%)
DD 98..179 CDD:417479 28/80 (35%)
CASc 227..480 CDD:237997 116/254 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3573
HGNC 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG44082
OrthoDB 1 1.010 - - D211777at32523
OrthoFinder 1 1.000 - - FOG0008092
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6038
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

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