DRSC/TRiP Functional Genomics Resources

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Protein Alignment HSDL2 and CG5590

DIOPT Version :9

Sequence 1:NP_115679.2 Gene:HSDL2 / 84263 HGNCID:18572 Length:418 Species:Homo sapiens
Sequence 2:NP_651578.1 Gene:CG5590 / 43325 FlyBaseID:FBgn0039537 Length:412 Species:Drosophila melanogaster


Alignment Length:422 Identity:238/422 - (56%)
Similarity:300/422 - (71%) Gaps:19/422 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     4 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKA 68
            |||:|||.|:|||||||||||.||||||:||||||:|||||:|||||.||||:||||||..||||
  Fly     3 NTGKLAGRTLFITGASRGIGKEIALKAARDGANIVVAAKTAEPHPKLPGTIYSAAEEIEKAGGKA 67

Human    69 LPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLAS 133
            .||:||||||||:.:|||.|:.|||||||::|||||||||||.||..||.|||.|:|||||:|.|
  Fly    68 YPCVVDVRDEQQVRSAVEAAVAKFGGIDIVINNASAISLTNTPDTDMKRYDLMHNINTRGTFLVS 132

Human   134 KACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFKGE-IAVNALWP 197
            |.|:||||||..||||||||||::.|.||..|.|||:|||||||.|||||.|||.| |:||||||
  Fly   133 KVCLPYLKKSNHAHILNISPPLSMKPKWFGPHVAYTMAKYGMSMCVLGMAAEFKDEGISVNALWP 197

Human   198 KTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSIF-QKPKSFTGNFVIDENILKEEGIENFDVYA 261
            :|||||||::||.||......||.:|:|||||:|. ::|:..||.|.:|:.:|:..||.:...||
  Fly   198 RTAIHTAAIEMLTGPDSAKWSRKPEIMADAAYAILTREPRQSTGQFFVDDEVLESAGITDLTEYA 262

Human   262 I--KPGHPLQPDFFLDEYPEAVSKKVESTGAVPEFKEEKLQLQPKPRSGA---VEETFRIVKDSL 321
            .  :....|..|||::|....|..:..:..|.            .|.||.   :.:.||.::..|
  Fly   263 CFRENADKLMVDFFVEEKGAPVENEAAAEDAA------------APASGGDVKIPQLFRKIESLL 315

Human   322 SDDVVKATQAIYLFELSGEDGGTWFLDLKSKGGNVGYGEPSDQADVVMSMTTDDFVKMFSGKLKP 386
            |.::|..|||::.|.:||.:.||||||||:..|:.|.|.|:...|..::|.:.:|..|||||||.
  Fly   316 SPEIVSKTQAVFQFNISGAEQGTWFLDLKNGSGSCGAGTPTAAPDATLTMNSKNFFDMFSGKLKA 380

Human   387 TMAFMSGKLKIKGNMALAIKLEKLMNQMNARL 418
            ..|:|:|||||.|:...|:||||||..:.::|
  Fly   381 APAYMTGKLKISGDFQKALKLEKLMKALKSKL 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HSDL2NP_115679.2 HSDL2_SDR_c 8..248 CDD:187663 171/241 (71%)
SCP2 319..412 CDD:376720 45/92 (49%)
CG5590NP_651578.1 FabG 5..245 CDD:223959 171/239 (72%)
PRK08278 7..277 CDD:181349 179/269 (67%)
SCP2 317..406 CDD:280250 43/88 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165147013
Domainoid 1 1.000 289 1.000 Domainoid score I1577
eggNOG 1 0.900 - - E1_KOG4170
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H75204
Inparanoid 1 1.050 452 1.000 Inparanoid score I1606
Isobase 1 0.950 - 0 Normalized mean entropy S1809
OMA 1 1.010 - - QHG63699
OrthoDB 1 1.010 - - D1361949at2759
OrthoFinder 1 1.000 - - FOG0005600
OrthoInspector 1 1.000 - - oto91445
orthoMCL 1 0.900 - - OOG6_103987
Panther 1 1.100 - - LDO PTHR42808
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5337
SonicParanoid 1 1.000 - - X4574
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.750

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