DRSC/TRiP Functional Genomics Resources

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Protein Alignment FBXW9 and SCAP

DIOPT Version :10

Sequence 1:NP_115677.2 Gene:FBXW9 / 84261 HGNCID:28136 Length:458 Species:Homo sapiens
Sequence 2:NP_788277.1 Gene:SCAP / 35529 FlyBaseID:FBgn0033052 Length:1276 Species:Drosophila melanogaster


Alignment Length:451 Identity:91/451 - (20%)
Similarity:145/451 - (32%) Gaps:156/451 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   114 VSDHVTWRLRALRRVRAPYPVVE----------EKNFDWPAACIALEQHLSRWAEDGRWVEYFCL 168
            :|.|....|..:|...|..|.:.          ::||.|.|...||:. |....:|.|......:
  Fly   744 LSGHYVTLLPTIRLSHAIAPELATLLRNPQEQLQQNFQWKALAAALDP-LDFNDDDVRRESPMVM 807

Human   169 AEG------HVASVDSVLLLQGGSL------------CLSGSRDRNVNLWDLRQLGTES------ 209
            |||      ....:...:||...|:            |:.   .||...|  |....||      
  Fly   808 AEGLPLVPKSPMEIFFAILLCCISIFVLCYTMVVFYRCIC---TRNYAEW--RSSWHESEAPYKQ 867

Human   210 -NQVLIKTLGTKRNSTHEGWVWSLAAQDHR----VCSGSW------DSTVKLWDMAADGQQFGEI 263
             .|:|            ||....:|...||    |..|::      ...:::|| |..|:|...|
  Fly   868 TEQIL------------EGVPTQIAGHKHRIECLVSDGAYIISCCLKGQIRVWD-ARSGEQLTSI 919

Human   264 KAS--------------------SAVLCLSYLPDILVTGTYDKKVTIYDPRAGPALLKHQQ---- 304
            ..|                    |.|.||.|..:::..|..:.:|.:::..||.....:|:    
  Fly   920 SRSDIQISQQRTDGQTLVRKLAVSPVWCLDYFDNLIAVGCANGRVELWESPAGLLKCAYQEDAKR 984

Human   305 ------LHSRPVLTLLADDRHIISGSEDHTLVVVDRRANSVLQRLQLDSYL--------LCMSYQ 355
                  :|       |..||.|::            |.|..|...:|::|.        ...:|:
  Fly   985 NQGITHIH-------LNGDRVIVA------------RLNGRLDFYRLETYYKGKQIDWGFTSAYR 1030

Human   356 EPQLWAGDNQGLLHVFANRNGCFQ-------------LIRSFDVGHSFPITGIQYSVGALYTTST 407
            ...:..| :.|.|.:...:..|.|             .:....:.|..|||.:|.....::|.|.
  Fly  1031 RTHVRTG-STGSLGLMLQQQRCQQEASQKTTKEEMKITLEGVRLAHQQPITCMQVVNDMVFTGSQ 1094

Human   408 DKTIRVHVPTDPPRTICTRRHD--NGLNRVCAEGNLVV----------AGSGDLSLEVWRL 456
            |.|::|:         |..:.|  ..|:..|.....:.          :||.|..|.||.|
  Fly  1095 DHTLKVY---------CLNKSDVEYTLHGHCGPVTCLFVDRWQPGTGGSGSQDGLLCVWDL 1146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FBXW9NP_115677.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..64
F-box_SF <89..120 CDD:459239 2/5 (40%)
WD40 <170..457 CDD:441893 75/385 (19%)
WD 1. /evidence=ECO:0000255 171..210 11/63 (17%)
WD40 repeat 177..222 CDD:293791 12/63 (19%)
WD 2. /evidence=ECO:0000255 220..261 12/50 (24%)
WD40 repeat 227..262 CDD:293791 11/44 (25%)
WD 3. /evidence=ECO:0000255 264..301 10/56 (18%)
WD40 repeat 270..301 CDD:293791 7/30 (23%)
WD40 repeat 305..344 CDD:293791 8/38 (21%)
WD 4. /evidence=ECO:0000255 305..342 8/36 (22%)
WD 5. /evidence=ECO:0000255 344..381 8/57 (14%)
WD40 repeat 350..385 CDD:293791 6/47 (13%)
WD 6. /evidence=ECO:0000255 387..424 10/36 (28%)
WD40 repeat 392..413 CDD:293791 7/20 (35%)
WD 7. /evidence=ECO:0000255 427..458 10/42 (24%)
SCAPNP_788277.1 Sterol-sensing 390..543 CDD:463544
WD40 878..1185 CDD:475233 59/299 (20%)
WD40 repeat 887..942 CDD:293791 9/55 (16%)
WD40 repeat 945..983 CDD:293791 9/37 (24%)
WD40 repeat 989..1070 CDD:293791 16/100 (16%)
WD40 repeat 1079..1114 CDD:293791 11/43 (26%)
WD40 repeat 1120..1157 CDD:293791 7/27 (26%)
WD40 repeat 1162..1196 CDD:293791
WD40 repeat 1201..1233 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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