DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRAF7 and MET30

DIOPT Version :10

Sequence 1:NP_115647.2 Gene:TRAF7 / 84231 HGNCID:20456 Length:670 Species:Homo sapiens
Sequence 2:NP_012218.1 Gene:MET30 / 854765 SGDID:S000001308 Length:640 Species:Saccharomyces cerevisiae


Alignment Length:550 Identity:121/550 - (22%)
Similarity:191/550 - (34%) Gaps:192/550 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   295 DDRFHEMHVALAQKD----------------QEIAFLRSMLGKLSEKIDQLEKSL---------- 333
            |.:|...|.|..::|                ||.:.:..::.|.|...|::.|.:          
Yeast   101 DIQFSPTHTACYKQDLKRTQEINANIAKLPLQEQSDIHHIISKYSNSNDKIRKLILDGILSTSCF 165

Human   334 ------------ELKFDVLDENQSKLSEDLMEF-------------RRDASMLNDE--------- 364
                        .:|.|.:.....:||..::.:             |:...:.:|:         
Yeast   166 PQLSYISSLVTHMIKIDFISILPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDRVWYHMCEQ 230

Human   365 --------------LSHI-NARLNMGILGSYDPQQI---------------FKCKGT-------- 391
                          |.|: .||:.....||.....|               ||.:..        
Yeast   231 HIDRKCPNCGWGLPLLHMKRARIQQNSTGSSSNADIQTQTTRPWKVIYRERFKVESNWRKGHCRI 295

Human   392 --FVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYS 454
              |.||...|  |.:.....|||:||.|.||.:||..|. |..:.|.||...|..|.....||.:
Yeast   296 QEFKGHMDGV--LTLQFNYRLLFTGSYDSTIGIWDLFTG-KLIRRLSGHSDGVKTLYFDDRKLIT 357

Human   455 GSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSL-KAIKVWDIVGTELKLKKELTG 518
            ||.|.||.||:....:.::|.|.|.:.|.::.|...|:.|||. |.:|||.:   |.:....|.|
Yeast   358 GSLDKTIRVWNYITGECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHV---ESRTCYTLRG 419

Human   519 LNHWVRALVAAQSYLYSGSYQ--------TIKIWDIRTLDCIHVLQ------------------- 556
            ...||..:     .|:..|:.        ||::|||||..|:.|.:                   
Yeast   420 HTEWVNCV-----KLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKIIPLTIKDVEN 479

Human   557 -----TSGGSV--------------------------YSIAVTNHHIVCGTYENLIHVWDIESKE 590
                 ||.||.                          .:|....|.:.|| .:|.|.:||:::.:
Yeast   480 LATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPTHLLSCG-LDNTIKLWDVKTGK 543

Human   591 QVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMIC-----------------TQT 638
            .:||..|||..|:.:|.    |..::.|.|:|.|::||.:.:..|                 ||:
Yeast   544 CIRTQFGHVEGVWDIAA----DNFRIISGSHDGSIKVWDLQSGKCMHTFNGRRLQRETQHTQTQS 604

Human   639 LLRHQGSVTALAVSRGRLFSGAVDSTVKVW 668
            |......:..:.:.....|||.....||::
Yeast   605 LGDKVAPIACVCIGDSECFSGDEFGCVKMY 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRAF7NP_115647.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..97
mRING-HC-C3HC3D_TRAF7 124..168 CDD:438306
Sina 208..>269 CDD:460824
DD_cGKI 282..322 CDD:473057 7/42 (17%)
PRK03918 283..>373 CDD:235175 21/152 (14%)
WD40 <387..668 CDD:441893 96/366 (26%)
WD 1. /evidence=ECO:0000255 394..433 16/38 (42%)
WD 2. /evidence=ECO:0000255 437..474 13/36 (36%)
WD40 repeat 443..477 CDD:293791 11/33 (33%)
WD 3. /evidence=ECO:0000255 477..513 12/36 (33%)
WD40 repeat 482..517 CDD:293791 11/35 (31%)
WD 4. /evidence=ECO:0000255 515..554 14/46 (30%)
WD40 repeat 527..556 CDD:293791 11/36 (31%)
WD 5. /evidence=ECO:0000255 557..594 12/62 (19%)
WD40 repeat 562..596 CDD:293791 10/59 (17%)
WD 6. /evidence=ECO:0000255 597..638 14/57 (25%)
WD40 repeat 604..639 CDD:293791 11/51 (22%)
WD 7. /evidence=ECO:0000255 641..669 5/27 (19%)
WD40 repeat 646..668 CDD:293791 5/21 (24%)
MET30NP_012218.1 F-box_SpPof1-like 183..228 CDD:438918 4/44 (9%)
WD40 295..590 CDD:238121 87/310 (28%)
WD40 repeat 305..340 CDD:293791 15/37 (41%)
WD40 repeat 346..380 CDD:293791 11/33 (33%)
WD40 repeat 385..418 CDD:293791 11/35 (31%)
WD40 repeat 425..460 CDD:293791 11/39 (28%)
WD40 repeat 488..549 CDD:293791 12/61 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.