DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TRAF7 and Traf7

DIOPT Version :10

Sequence 1:NP_115647.2 Gene:TRAF7 / 84231 HGNCID:20456 Length:670 Species:Homo sapiens
Sequence 2:NP_001402082.1 Gene:Traf7 / 360491 RGDID:1559653 Length:670 Species:Rattus norvegicus


Alignment Length:671 Identity:650/671 - (96%)
Similarity:658/671 - (98%) Gaps:2/671 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSSGKSARYNRFSGGPSNLPTPDVTTGTRMETTFGPAFSAVTTITK-ADGTSTYKQHCRTPSSSS 64
            |||.||||||||||||:|||..| ::||||||||||.||.|||||| ||||||||||.|||||||
  Rat     1 MSSAKSARYNRFSGGPANLPASD-SSGTRMETTFGPTFSTVTTITKAADGTSTYKQHRRTPSSSS 64

Human    65 TLAYSPRDEEDSMPPISTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKL 129
            |||||||||||.||||:||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    65 TLAYSPRDEEDGMPPINTPRRSDSAISVRSLHSESSMSLRSTFSLPEEEEEPEPLVFAEQPSVKL 129

Human   130 CCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNVKLTVVVNNIAVAEQIGELFIHCRHGCRV 194
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||.
  Rat   130 CCQLCCSVFKDPVITTCGHTFCRRCALKSEKCPVDNAKLTVVVNNIAVAEQIGELFIHCRHGCRA 194

Human   195 AGSGKPPIFEVDPRGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLRMNLEAHLKECEHIKC 259
            ||:|||.:|||||||||||||||||||||.|||||||||||||||||||:|||||||||||||||
  Rat   195 AGTGKPGVFEVDPRGCPFTIKLSARKDHESSCDYRPVRCPNNPSCPPLLKMNLEAHLKECEHIKC 259

Human   260 PHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLGKLSE 324
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   260 PHSKYGCTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKDQEIAFLRSMLGKLSE 324

Human   325 KIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCK 389
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   325 KIDQLEKSLELKFDVLDENQSKLSEDLMEFRRDASMLNDELSHINARLNMGILGSYDPQQIFKCK 389

Human   390 GTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYS 454
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   390 GTFVGHQGPVWCLCVYSMGDLLFSGSSDKTIKVWDTCTTYKCQKTLEGHDGIVLALCIQGCKLYS 454

Human   455 GSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNVLFSGSLKAIKVWDIVGTELKLKKELTGL 519
            ||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||
  Rat   455 GSADCTIIVWDIQNLQKVNTIRAHDNPVCTLVSSHNMLFSGSLKAIKVWDIVGTELKLKKELTGL 519

Human   520 NHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW 584
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   520 NHWVRALVAAQSYLYSGSYQTIKIWDIRTLDCIHVLQTSGGSVYSIAVTNHHIVCGTYENLIHVW 584

Human   585 DIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTAL 649
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   585 DIESKEQVRTLTGHVGTVYALAVISTPDQTKVFSASYDRSLRVWSMDNMICTQTLLRHQGSVTAL 649

Human   650 AVSRGRLFSGAVDSTVKVWTC 670
            |||||||||||||||||||||
  Rat   650 AVSRGRLFSGAVDSTVKVWTC 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRAF7NP_115647.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 28/35 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..97 44/47 (94%)
mRING-HC-C3HC3D_TRAF7 124..168 CDD:438306 42/43 (98%)
Sina 208..>269 CDD:460824 58/60 (97%)
DD_cGKI 282..322 CDD:473057 39/39 (100%)
PRK03918 283..>373 CDD:235175 89/89 (100%)
WD40 <387..668 CDD:441893 279/280 (100%)
WD 1. /evidence=ECO:0000255 394..433 38/38 (100%)
WD 2. /evidence=ECO:0000255 437..474 36/36 (100%)
WD40 repeat 443..477 CDD:293791 33/33 (100%)
WD 3. /evidence=ECO:0000255 477..513 34/35 (97%)
WD40 repeat 482..517 CDD:293791 33/34 (97%)
WD 4. /evidence=ECO:0000255 515..554 38/38 (100%)
WD40 repeat 527..556 CDD:293791 28/28 (100%)
WD 5. /evidence=ECO:0000255 557..594 36/36 (100%)
WD40 repeat 562..596 CDD:293791 33/33 (100%)
WD 6. /evidence=ECO:0000255 597..638 40/40 (100%)
WD40 repeat 604..639 CDD:293791 34/34 (100%)
WD 7. /evidence=ECO:0000255 641..669 27/27 (100%)
WD40 repeat 646..668 CDD:293791 21/21 (100%)
Traf7NP_001402082.1 mRING-HC-C3HC3D_TRAF7 124..168 CDD:438306 42/43 (98%)
Sina 208..>269 CDD:460824 58/60 (97%)
DD_cGKI 282..322 CDD:473057 39/39 (100%)
PRK03918 283..>373 CDD:235175 89/89 (100%)
WD40 <387..668 CDD:441893 279/280 (100%)
WD40 repeat 443..477 CDD:293791 33/33 (100%)
WD40 repeat 482..517 CDD:293791 33/34 (97%)
WD40 repeat 527..556 CDD:293791 28/28 (100%)
WD40 repeat 562..596 CDD:293791 33/33 (100%)
WD40 repeat 604..639 CDD:293791 34/34 (100%)
WD40 repeat 646..668 CDD:293791 21/21 (100%)

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