DRSC/TRiP Functional Genomics Resources

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Protein Alignment TRAF7 and trf-2

DIOPT Version :10

Sequence 1:NP_115647.2 Gene:TRAF7 / 84231 HGNCID:20456 Length:670 Species:Homo sapiens
Sequence 2:NP_491534.2 Gene:trf-2 / 172151 WormBaseID:WBGene00022454 Length:335 Species:Caenorhabditis elegans


Alignment Length:132 Identity:23/132 - (17%)
Similarity:44/132 - (33%) Gaps:54/132 - (40%)


- Green bases have known domain annotations that are detailed below.


Human   229 RPVRCPNNPSCP---PLLR--------------MNLEAHLKECE-----------HIKCPHSKYG 265
            :|::..:||..|   |.:.              :::..|::..|           .|.||..::|
 Worm    28 KPIKSASNPPTPLDSPFMAGAINRPRTSTRSVGVSIPIHVEGEEPTAPKSIVPDNWIDCPFKEHG 92

Human   266 CTFIGNQDTYETHLETCRFEGLKEFLQQTDDRFHEMHVALAQKD----------QEIAFLRSMLG 320
            |...|.....:.|:.              |||  .:|:.|..:.          |:.|::...:|
 Worm    93 CHKKGENSEVKRHVR--------------DDR--NLHLVLLCQSLNPIRTKINIQQSAYVDKYVG 141

Human   321 KL 322
            .|
 Worm   142 ML 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TRAF7NP_115647.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..97
mRING-HC-C3HC3D_TRAF7 124..168 CDD:438306
Sina 208..>269 CDD:460824 12/67 (18%)
DD_cGKI 282..322 CDD:473057 8/49 (16%)
PRK03918 283..>373 CDD:235175 9/50 (18%)
WD40 <387..668 CDD:441893
WD 1. /evidence=ECO:0000255 394..433
WD 2. /evidence=ECO:0000255 437..474
WD40 repeat 443..477 CDD:293791
WD 3. /evidence=ECO:0000255 477..513
WD40 repeat 482..517 CDD:293791
WD 4. /evidence=ECO:0000255 515..554
WD40 repeat 527..556 CDD:293791
WD 5. /evidence=ECO:0000255 557..594
WD40 repeat 562..596 CDD:293791
WD 6. /evidence=ECO:0000255 597..638
WD40 repeat 604..639 CDD:293791
WD 7. /evidence=ECO:0000255 641..669
WD40 repeat 646..668 CDD:293791
trf-2NP_491534.2 MATH_TRAF_C 158..304 CDD:238168
Blue background indicates that the domain is not in the aligned region.

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