DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AT1G54730 and CG33282

DIOPT Version :9

Sequence 1:NP_850964.1 Gene:AT1G54730 / 841914 AraportID:AT1G54730 Length:470 Species:Arabidopsis thaliana
Sequence 2:NP_001097067.1 Gene:CG33282 / 2768939 FlyBaseID:FBgn0053282 Length:460 Species:Drosophila melanogaster


Alignment Length:475 Identity:124/475 - (26%)
Similarity:212/475 - (44%) Gaps:80/475 - (16%)


- Green bases have known domain annotations that are detailed below.


plant    33 LLTTFVAVSGSFVFGSAIGYSSP-------VQSDLTKELNLSVAEYSLFGSILTIGAMIGAAMSG 90
            ||.|.:....:|..|..:|:.||       ..|.|..|:||  |:.|..||:|.:.::.|.....
  Fly    18 LLATVIVNIITFGHGVGVGWLSPTLTKIQTADSPLDFEVNL--AQISWLGSMLGLDSLCGNLTIA 80

plant    91 RIADMIGRRATMGFSEMFCI---LG-----WLAIYLSKVAIWLDVGRFLVGYGMGVFSFVVPVYI 147
            .:.:..||:        ||:   .|     |:.||.:....:|...|||.|:..|....|||::|
  Fly    81 MLIERAGRK--------FCLYLMAGPYACIWILIYCASNVYYLYAARFLCGFTGGAGYLVVPIFI 137

plant   148 AEITPKGLRGGFTTVHQLLICLGVSVTYLLGSFIGWRILALIGMIPCVVQMMGLFVIPESPRWLA 212
            :|:....:||..|::..|.:.||:...|:|.:::.:.::..:.:|..|...:...::||:..:|.
  Fly   138 SEVADSNIRGALTSMVMLSVDLGILAGYILSTYLAYHVVPFLAIILPVAYFIANIMLPETAPYLL 202

plant   213 KVGKWEEFEIALQRLRGESADISYESNEI----------KDYTRRLTDLSEGSIVDLFQPQ---Y 264
            |..:....|.:.:..|.:.:.|..:::::          ...||..|.||...:..  :|.   :
  Fly   203 KKSQLAAAENSFRYYRNQRSAICEQTSKVNFEELRTAVLSQQTRNATPLSYKDLTT--KPALKGF 265

plant   265 AKSLVVGVGLMVLQQFGGVNGIAFYASSIFESAG--VSSKIGMIAMVVVQIPMTTLGVLLMDKSG 327
            |.|:|:.:|    .||.||.....|.|.||:::|  |......|.:.:|||.......:|:|..|
  Fly   266 AASIVLSLG----YQFSGVFSFINYMSDIFKASGSVVDVNTATIIIGLVQIVGVYTSTILVDIVG 326

plant   328 RRPLLLISATGTCIGCFLVGLSFSLQFVKQLSGDASYLALTGVLVYTGSFSLGMGGIPWVIMSEI 392
            ||.|:|||..|..|||...|....|..:..|| |.::|.|..:::.....::|:.||.::::.|:
  Fly   327 RRVLMLISTMGVGIGCIAFGCFTYLAKIYDLS-DFNWLPLVLMIIICYVANIGLIGIFFLVLVEL 390

plant   393 FPIDIKGSAGSLVTVV-------------SWVGSWIISFTFNFLMNWNPAG----TFYVFATVCG 440
            ||:.|:..|.||..:.             ..:..|.||||.     |..|.    ||:.|..   
  Fly   391 FPVKIRSLATSLSVIFLSLLVFGTLKLFPLMLHYWGISFTM-----WFSAASALLTFFYFWL--- 447

plant   441 ATVIFVAKLVPETKGRTLEE 460
                    .:.||||:::.|
  Fly   448 --------FLQETKGKSMIE 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AT1G54730NP_850964.1 MFS_GLUT6_8_Class3_like 37..460 CDD:340916 120/469 (26%)
CG33282NP_001097067.1 MFS 21..448 CDD:119392 117/459 (25%)
MFS_1 53..409 CDD:284993 99/372 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53651
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.