DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZIC4 and iec1

DIOPT Version :10

Sequence 1:NP_001161850.1 Gene:ZIC4 / 84107 HGNCID:20393 Length:384 Species:Homo sapiens
Sequence 2:NP_594663.1 Gene:iec1 / 2542854 PomBaseID:SPAC144.02 Length:249 Species:Schizosaccharomyces pombe


Alignment Length:135 Identity:42/135 - (31%)
Similarity:62/135 - (45%) Gaps:37/135 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   163 PGAFFRYMRQPI----KQELICKWLAADGTATPSLCSKTFSTMHELVTHV--------------- 208
            ||:       ||    :.|.||.|.:         |.:...|:..||.|:               
pombe    12 PGS-------PIDLEPESETICHWQS---------CEQDLLTLDNLVHHIHNGTTSNLRLISNIN 60

Human   209 -TVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLK 272
             .::|:|. .:..:.|.|::|||:|....:::.||.|:|.|||||||.|..|.|.:.|.||:.|.
pombe    61 SILDHIGN-RRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICSVPECDRSFTRSDALA 124

Human   273 IHKRT 277
            .|.||
pombe   125 KHMRT 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZIC4NP_001161850.1 zf_ZIC 172..216 CDD:436441 13/63 (21%)
COG5048 <192..338 CDD:227381 34/102 (33%)
C2H2 Zn finger 228..248 CDD:275368 8/19 (42%)
C2H2 Zn finger 256..278 CDD:275368 10/22 (45%)
C2H2 Zn finger 286..308 CDD:275368
C2H2 Zn finger 316..338 CDD:275368
iec1NP_594663.1 COG5048 1..>249 CDD:227381 42/135 (31%)
C2H2 Zn finger 108..129 CDD:275368 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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