DRSC/TRiP Functional Genomics Resources

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Protein Alignment ARL6 and CG17819

DIOPT Version :9

Sequence 1:NP_001310442.1 Gene:ARL6 / 84100 HGNCID:13210 Length:193 Species:Homo sapiens
Sequence 2:NP_650994.1 Gene:CG17819 / 42579 FlyBaseID:FBgn0038915 Length:186 Species:Drosophila melanogaster


Alignment Length:165 Identity:51/165 - (30%)
Similarity:90/165 - (54%) Gaps:11/165 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    20 VLCLGLDNSGKTTIINKL----KPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLW 80
            :|.|||||:||:|:.::|    ...:.:|.|.:....|:|..|:     ..::|::|:.:.|.:|
  Fly    23 LLILGLDNAGKSTLTDRLAEIFNGESKESNNQVSEWSFTINNFR-----VQLWDINGELKNRQIW 82

Human    81 EHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQ 145
            ..|||:...:|||:||:|.||:..|:..|..:|.|.::.:  .|:|..:||.|...:::...|..
  Fly    83 PKYYKKVNVLIFVLDSTDALRLSEARCVLCDVLMHQELDN--APLLIVSNKKDASGSLSMSTVID 145

Human   146 LLCLENIKDKPWHICASDAIKGEGLQEGVDWLQEK 180
            |:.|..:..:.|.........|.|:||.|:|:.||
  Fly   146 LMGLYRLTGRDWTFEECSMRTGSGVQEIVNWINEK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ARL6NP_001310442.1 Arl6 19..180 CDD:206722 49/163 (30%)
CG17819NP_650994.1 Arf_Arl 22..180 CDD:206644 49/163 (30%)
Ras 23..183 CDD:278499 51/165 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0070
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.820

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