DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPOP and rdx

DIOPT Version :10

Sequence 1:NP_003554.1 Gene:SPOP / 8405 HGNCID:11254 Length:374 Species:Homo sapiens
Sequence 2:NP_650326.3 Gene:rdx / 41704 FlyBaseID:FBgn0264493 Length:829 Species:Drosophila melanogaster


Alignment Length:374 Identity:298/374 - (79%)
Similarity:338/374 - (90%) Gaps:2/374 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKL 65
            :|||||||.| |::: ||||:|||||:||||||||||||||||||||||||:||||||:||||||
  Fly   458 VSRVPSPPLP-EVNT-PVAENWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSAGANDKL 520

Human    66 KWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKD 130
            ||||||||||||||||||||||||||||.||||||||||||||||.|||||||||||||||||||
  Fly   521 KWCLRVNPKGLDEESKDYLSLYLLLVSCNKSEVRAKFKFSILNAKREETKAMESQRAYRFVQGKD 585

Human   131 WGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWE 195
            |||||||||||||||||||||:||||:|||||||.||||||||:.:...|||||:|:::||.|::
  Fly   586 WGFKKFIRRDFLLDEANGLLPEDKLTIFCEVSVVADSVNISGQSNIVQFKVPECKLSEDLGNLFD 650

Human   196 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 260
            |.:|:|..|.|.|:|||||||||||||.||:|||||||||.|.|||.|.||:.||.|||:.||||
  Fly   651 NEKFSDVTLSVGGREFQAHKAILAARSDVFAAMFEHEMEERKLNRVAITDVDHEVLKEMLRFIYT 715

Human   261 GKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
            ||||||:||||||||||||||||:||||||:|||.|||||.|||.|||||||||||||.|.:|||
  Fly   716 GKAPNLEKMADDLLAAADKYALEKLKVMCEEALCVNLSVETAAETLILADLHSADQLKAQTIDFI 780

Human   326 NYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS 374
            |.||:||:|||||::|:.:|.||:|||:|:||:.|.|.:||||||:|.|
  Fly   781 NTHATDVMETSGWQNMITTHSHLIAEAFRALATQQIPPIGPPRKRVKMS 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPOPNP_003554.1 MATH_SPOP 28..166 CDD:239743 131/137 (96%)
Required for nuclear localization 71..191 104/119 (87%)
Important for binding substrate proteins 123..133 9/9 (100%)
BTB_POZ_SPOP-like 182..301 CDD:349588 88/118 (75%)
Important for homodimerization 186..217 16/30 (53%)
BACK_SPOP 297..367 CDD:350593 47/69 (68%)
Important for homodimerization 297..355 41/57 (72%)
rdxNP_650326.3 MATH_SPOP 483..621 CDD:239743 131/137 (96%)
BTB_POZ_roadkill-like 637..757 CDD:349654 89/119 (75%)
BACK_roadkill_like 752..825 CDD:350595 50/72 (69%)

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