DRSC/TRiP Functional Genomics Resources

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Protein Alignment SPOP and spop

DIOPT Version :10

Sequence 1:NP_003554.1 Gene:SPOP / 8405 HGNCID:11254 Length:374 Species:Homo sapiens
Sequence 2:NP_957424.1 Gene:spop / 100005514 ZFINID:ZDB-GENE-040426-1378 Length:374 Species:Danio rerio


Alignment Length:374 Identity:364/374 - (97%)
Similarity:370/374 - (98%) Gaps:0/374 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSRVPSPPPPAEMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKL 65
            |||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish     1 MSRVPSPPPPAEMTSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSGANDKL 65

Human    66 KWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKD 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish    66 KWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQRAYRFVQGKD 130

Human   131 WGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPECRLADELGGLWE 195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||
Zfish   131 WGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQNTMNMVKVPDCRLADELGGLWE 195

Human   196 NSRFTDCCLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMCFIYT 260
            :||||||.||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||
Zfish   196 HSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEAEVFKEMMFFIYT 260

Human   261 GKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNLSVENAAEILILADLHSADQLKTQAVDFI 325
            ||||||||||||||||||||||||||||||||||::|||||||||||||||||||||||||||||
Zfish   261 GKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVENAAEILILADLHSADQLKTQAVDFI 325

Human   326 NYHASDVLETSGWKSMVVSHPHLVAEAYRSLASAQCPFLGPPRKRLKQS 374
            |||||||:|||||||||.|||||||||||||||||||||||||||||||
Zfish   326 NYHASDVMETSGWKSMVASHPHLVAEAYRSLASAQCPFLGPPRKRLKQS 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SPOPNP_003554.1 MATH_SPOP 28..166 CDD:239743 137/137 (100%)
Required for nuclear localization 71..191 118/119 (99%)
Important for binding substrate proteins 123..133 9/9 (100%)
BTB_POZ_SPOP-like 182..301 CDD:349588 111/118 (94%)
Important for homodimerization 186..217 28/30 (93%)
BACK_SPOP 297..367 CDD:350593 67/69 (97%)
Important for homodimerization 297..355 55/57 (96%)
spopNP_957424.1 MATH_SPOP 28..166 CDD:239743 137/137 (100%)
Required for nuclear localization. /evidence=ECO:0000250 71..191 118/119 (99%)
BTB_POZ 179..301 CDD:453885 114/121 (94%)
BACK_SPOP 297..367 CDD:350593 67/69 (97%)
Homodimerization. /evidence=ECO:0000250 297..355 55/57 (96%)

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